Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5043 | 15352;15353;15354 | chr2:178734797;178734796;178734795 | chr2:179599524;179599523;179599522 |
N2AB | 4726 | 14401;14402;14403 | chr2:178734797;178734796;178734795 | chr2:179599524;179599523;179599522 |
N2A | 3799 | 11620;11621;11622 | chr2:178734797;178734796;178734795 | chr2:179599524;179599523;179599522 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1578215701 | None | 0.811 | N | 0.385 | 0.208 | 0.208816687407 | gnomAD-4.0.0 | 6.84213E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15945E-05 | 0 |
D/V | None | None | 0.984 | N | 0.518 | 0.388 | 0.389283895039 | gnomAD-4.0.0 | 6.84213E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 0 | 0 |
D/Y | rs1345038643 | -0.136 | 0.995 | N | 0.539 | 0.276 | 0.401753679984 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 9.19118E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1539 | likely_benign | 0.1406 | benign | -0.266 | Destabilizing | 0.896 | D | 0.445 | neutral | N | 0.455787054 | None | None | N |
D/C | 0.6028 | likely_pathogenic | 0.5888 | pathogenic | 0.241 | Stabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
D/E | 0.1634 | likely_benign | 0.1464 | benign | -0.286 | Destabilizing | 0.026 | N | 0.253 | neutral | N | 0.441498178 | None | None | N |
D/F | 0.6033 | likely_pathogenic | 0.5657 | pathogenic | -0.424 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
D/G | 0.1482 | likely_benign | 0.1428 | benign | -0.433 | Destabilizing | 0.811 | D | 0.385 | neutral | N | 0.454632747 | None | None | N |
D/H | 0.2555 | likely_benign | 0.236 | benign | -0.362 | Destabilizing | 0.984 | D | 0.395 | neutral | N | 0.458550768 | None | None | N |
D/I | 0.5052 | ambiguous | 0.4475 | ambiguous | 0.117 | Stabilizing | 0.988 | D | 0.543 | neutral | None | None | None | None | N |
D/K | 0.383 | ambiguous | 0.3269 | benign | 0.444 | Stabilizing | 0.851 | D | 0.377 | neutral | None | None | None | None | N |
D/L | 0.4409 | ambiguous | 0.4139 | ambiguous | 0.117 | Stabilizing | 0.976 | D | 0.507 | neutral | None | None | None | None | N |
D/M | 0.6071 | likely_pathogenic | 0.5742 | pathogenic | 0.366 | Stabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
D/N | 0.0733 | likely_benign | 0.0737 | benign | 0.261 | Stabilizing | 0.011 | N | 0.181 | neutral | N | 0.404791532 | None | None | N |
D/P | 0.8511 | likely_pathogenic | 0.816 | pathogenic | 0.011 | Stabilizing | 0.988 | D | 0.393 | neutral | None | None | None | None | N |
D/Q | 0.3295 | likely_benign | 0.2973 | benign | 0.252 | Stabilizing | 0.952 | D | 0.357 | neutral | None | None | None | None | N |
D/R | 0.391 | ambiguous | 0.3469 | ambiguous | 0.468 | Stabilizing | 0.976 | D | 0.457 | neutral | None | None | None | None | N |
D/S | 0.1109 | likely_benign | 0.1068 | benign | 0.152 | Stabilizing | 0.851 | D | 0.377 | neutral | None | None | None | None | N |
D/T | 0.2751 | likely_benign | 0.2432 | benign | 0.277 | Stabilizing | 0.919 | D | 0.412 | neutral | None | None | None | None | N |
D/V | 0.3062 | likely_benign | 0.2623 | benign | 0.011 | Stabilizing | 0.984 | D | 0.518 | neutral | N | 0.480359296 | None | None | N |
D/W | 0.8745 | likely_pathogenic | 0.8654 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
D/Y | 0.2557 | likely_benign | 0.2295 | benign | -0.196 | Destabilizing | 0.995 | D | 0.539 | neutral | N | 0.461055785 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.