Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5052 | 15379;15380;15381 | chr2:178734770;178734769;178734768 | chr2:179599497;179599496;179599495 |
N2AB | 4735 | 14428;14429;14430 | chr2:178734770;178734769;178734768 | chr2:179599497;179599496;179599495 |
N2A | 3808 | 11647;11648;11649 | chr2:178734770;178734769;178734768 | chr2:179599497;179599496;179599495 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs950432591 | None | 1.0 | D | 0.838 | 0.908 | 0.851131110001 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs950432591 | None | 1.0 | D | 0.838 | 0.908 | 0.851131110001 | gnomAD-4.0.0 | 6.57022E-06 | None | None | None | None | N | None | 2.41185E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/F | rs950432591 | None | 0.999 | D | 0.702 | 0.743 | 0.61690119055 | gnomAD-4.0.0 | 1.36864E-06 | None | None | None | None | N | None | 0 | 0 | None | 7.65697E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9918 | likely_pathogenic | 0.9898 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/C | 0.8822 | likely_pathogenic | 0.8531 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.826171236 | None | None | N |
Y/D | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.826171236 | None | None | N |
Y/E | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/F | 0.1379 | likely_benign | 0.1207 | benign | -1.115 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | D | 0.609556009 | None | None | N |
Y/G | 0.9926 | likely_pathogenic | 0.9912 | pathogenic | -3.048 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/H | 0.9664 | likely_pathogenic | 0.9642 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.793210419 | None | None | N |
Y/I | 0.7739 | likely_pathogenic | 0.7079 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Y/K | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -2.018 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/L | 0.7822 | likely_pathogenic | 0.7292 | pathogenic | -1.182 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
Y/M | 0.9569 | likely_pathogenic | 0.9417 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/N | 0.9854 | likely_pathogenic | 0.9832 | pathogenic | -2.764 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.826171236 | None | None | N |
Y/P | 0.9978 | likely_pathogenic | 0.998 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/Q | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/R | 0.9941 | likely_pathogenic | 0.9934 | pathogenic | -1.977 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/S | 0.9819 | likely_pathogenic | 0.9791 | pathogenic | -3.28 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.826171236 | None | None | N |
Y/T | 0.9903 | likely_pathogenic | 0.9878 | pathogenic | -2.919 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/V | 0.741 | likely_pathogenic | 0.6862 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Y/W | 0.718 | likely_pathogenic | 0.6994 | pathogenic | -0.46 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.