Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5056 | 15391;15392;15393 | chr2:178734758;178734757;178734756 | chr2:179599485;179599484;179599483 |
N2AB | 4739 | 14440;14441;14442 | chr2:178734758;178734757;178734756 | chr2:179599485;179599484;179599483 |
N2A | 3812 | 11659;11660;11661 | chr2:178734758;178734757;178734756 | chr2:179599485;179599484;179599483 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs763353350 | None | 0.946 | D | 0.663 | 0.583 | 0.498259528926 | gnomAD-4.0.0 | 2.73751E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59859E-06 | 0 | 0 |
A/T | rs763353350 | -1.532 | 0.896 | D | 0.662 | 0.604 | 0.524843318063 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
A/T | rs763353350 | -1.532 | 0.896 | D | 0.662 | 0.604 | 0.524843318063 | gnomAD-4.0.0 | 6.84377E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52029E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9268 | likely_pathogenic | 0.9148 | pathogenic | -1.8 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
A/D | 0.9953 | likely_pathogenic | 0.9954 | pathogenic | -2.328 | Highly Destabilizing | 0.996 | D | 0.856 | deleterious | None | None | None | None | N |
A/E | 0.9901 | likely_pathogenic | 0.9905 | pathogenic | -2.197 | Highly Destabilizing | 0.984 | D | 0.832 | deleterious | D | 0.822504561 | None | None | N |
A/F | 0.9495 | likely_pathogenic | 0.9423 | pathogenic | -1.045 | Destabilizing | 0.976 | D | 0.853 | deleterious | None | None | None | None | N |
A/G | 0.3918 | ambiguous | 0.418 | ambiguous | -1.832 | Destabilizing | 0.946 | D | 0.659 | neutral | D | 0.674029768 | None | None | N |
A/H | 0.9973 | likely_pathogenic | 0.9971 | pathogenic | -1.933 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
A/I | 0.6281 | likely_pathogenic | 0.6328 | pathogenic | -0.302 | Destabilizing | 0.851 | D | 0.73 | prob.delet. | None | None | None | None | N |
A/K | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -1.563 | Destabilizing | 0.988 | D | 0.827 | deleterious | None | None | None | None | N |
A/L | 0.6655 | likely_pathogenic | 0.6239 | pathogenic | -0.302 | Destabilizing | 0.702 | D | 0.724 | prob.delet. | None | None | None | None | N |
A/M | 0.7679 | likely_pathogenic | 0.7699 | pathogenic | -0.616 | Destabilizing | 0.988 | D | 0.818 | deleterious | None | None | None | None | N |
A/N | 0.9899 | likely_pathogenic | 0.9895 | pathogenic | -1.718 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
A/P | 0.9908 | likely_pathogenic | 0.9909 | pathogenic | -0.627 | Destabilizing | 0.995 | D | 0.834 | deleterious | D | 0.788246233 | None | None | N |
A/Q | 0.9908 | likely_pathogenic | 0.9907 | pathogenic | -1.668 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
A/R | 0.9937 | likely_pathogenic | 0.9931 | pathogenic | -1.429 | Destabilizing | 0.988 | D | 0.833 | deleterious | None | None | None | None | N |
A/S | 0.5294 | ambiguous | 0.5473 | ambiguous | -2.201 | Highly Destabilizing | 0.946 | D | 0.663 | neutral | D | 0.714580571 | None | None | N |
A/T | 0.5973 | likely_pathogenic | 0.6262 | pathogenic | -1.945 | Destabilizing | 0.896 | D | 0.662 | neutral | D | 0.72326977 | None | None | N |
A/V | 0.3155 | likely_benign | 0.3267 | benign | -0.627 | Destabilizing | 0.011 | N | 0.32 | neutral | D | 0.529070907 | None | None | N |
A/W | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -1.576 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
A/Y | 0.9887 | likely_pathogenic | 0.9874 | pathogenic | -1.125 | Destabilizing | 0.988 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.