Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5057 | 15394;15395;15396 | chr2:178734755;178734754;178734753 | chr2:179599482;179599481;179599480 |
N2AB | 4740 | 14443;14444;14445 | chr2:178734755;178734754;178734753 | chr2:179599482;179599481;179599480 |
N2A | 3813 | 11662;11663;11664 | chr2:178734755;178734754;178734753 | chr2:179599482;179599481;179599480 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.097 | 0.116 | 0.304108284078 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88274E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0898 | likely_benign | 0.0918 | benign | -1.252 | Destabilizing | None | N | 0.111 | neutral | N | 0.486662767 | None | None | I |
V/C | 0.5114 | ambiguous | 0.5341 | ambiguous | -1.03 | Destabilizing | 0.356 | N | 0.469 | neutral | None | None | None | None | I |
V/D | 0.2302 | likely_benign | 0.2425 | benign | -1.114 | Destabilizing | 0.072 | N | 0.568 | neutral | None | None | None | None | I |
V/E | 0.1361 | likely_benign | 0.1566 | benign | -1.182 | Destabilizing | 0.012 | N | 0.47 | neutral | N | 0.440604188 | None | None | I |
V/F | 0.1052 | likely_benign | 0.1038 | benign | -1.239 | Destabilizing | 0.072 | N | 0.492 | neutral | None | None | None | None | I |
V/G | 0.1296 | likely_benign | 0.1384 | benign | -1.478 | Destabilizing | 0.012 | N | 0.533 | neutral | N | 0.501585557 | None | None | I |
V/H | 0.2535 | likely_benign | 0.2782 | benign | -0.932 | Destabilizing | 0.356 | N | 0.551 | neutral | None | None | None | None | I |
V/I | 0.0669 | likely_benign | 0.0654 | benign | -0.764 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | I |
V/K | 0.1188 | likely_benign | 0.1271 | benign | -0.927 | Destabilizing | 0.016 | N | 0.477 | neutral | None | None | None | None | I |
V/L | 0.1033 | likely_benign | 0.1056 | benign | -0.764 | Destabilizing | None | N | 0.097 | neutral | N | 0.465624341 | None | None | I |
V/M | 0.0665 | likely_benign | 0.0719 | benign | -0.596 | Destabilizing | 0.005 | N | 0.251 | neutral | N | 0.510265694 | None | None | I |
V/N | 0.137 | likely_benign | 0.14 | benign | -0.694 | Destabilizing | 0.072 | N | 0.569 | neutral | None | None | None | None | I |
V/P | 0.8658 | likely_pathogenic | 0.8774 | pathogenic | -0.892 | Destabilizing | 0.136 | N | 0.585 | neutral | None | None | None | None | I |
V/Q | 0.1176 | likely_benign | 0.1361 | benign | -0.991 | Destabilizing | 0.003 | N | 0.367 | neutral | None | None | None | None | I |
V/R | 0.1023 | likely_benign | 0.1168 | benign | -0.337 | Destabilizing | 0.072 | N | 0.595 | neutral | None | None | None | None | I |
V/S | 0.0927 | likely_benign | 0.0969 | benign | -1.165 | Destabilizing | 0.001 | N | 0.215 | neutral | None | None | None | None | I |
V/T | 0.067 | likely_benign | 0.0751 | benign | -1.133 | Destabilizing | None | N | 0.113 | neutral | None | None | None | None | I |
V/W | 0.489 | ambiguous | 0.5369 | ambiguous | -1.288 | Destabilizing | 0.864 | D | 0.537 | neutral | None | None | None | None | I |
V/Y | 0.3005 | likely_benign | 0.3077 | benign | -1.004 | Destabilizing | 0.356 | N | 0.483 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.