Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5058 | 15397;15398;15399 | chr2:178734752;178734751;178734750 | chr2:179599479;179599478;179599477 |
N2AB | 4741 | 14446;14447;14448 | chr2:178734752;178734751;178734750 | chr2:179599479;179599478;179599477 |
N2A | 3814 | 11665;11666;11667 | chr2:178734752;178734751;178734750 | chr2:179599479;179599478;179599477 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs773648136 | -1.005 | 0.999 | D | 0.563 | 0.546 | 0.232513804876 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
N/S | rs773648136 | -1.005 | 0.999 | D | 0.563 | 0.546 | 0.232513804876 | gnomAD-4.0.0 | 3.18528E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72338E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9729 | likely_pathogenic | 0.979 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
N/C | 0.9257 | likely_pathogenic | 0.9379 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
N/D | 0.9111 | likely_pathogenic | 0.9127 | pathogenic | -1.112 | Destabilizing | 0.999 | D | 0.595 | neutral | D | 0.709354663 | None | None | I |
N/E | 0.994 | likely_pathogenic | 0.994 | pathogenic | -1.051 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
N/F | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/G | 0.9326 | likely_pathogenic | 0.9386 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | I |
N/H | 0.94 | likely_pathogenic | 0.9446 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | D | 0.684128925 | None | None | I |
N/I | 0.983 | likely_pathogenic | 0.9844 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.767405593 | None | None | I |
N/K | 0.9946 | likely_pathogenic | 0.995 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.731731557 | None | None | I |
N/L | 0.9508 | likely_pathogenic | 0.9531 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
N/M | 0.9719 | likely_pathogenic | 0.9758 | pathogenic | 0.376 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/P | 0.991 | likely_pathogenic | 0.9922 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
N/Q | 0.994 | likely_pathogenic | 0.994 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
N/R | 0.9929 | likely_pathogenic | 0.9928 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/S | 0.4102 | ambiguous | 0.4605 | ambiguous | -0.863 | Destabilizing | 0.999 | D | 0.563 | neutral | D | 0.571986437 | None | None | I |
N/T | 0.7865 | likely_pathogenic | 0.8154 | pathogenic | -0.639 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | D | 0.662833165 | None | None | I |
N/V | 0.9769 | likely_pathogenic | 0.9801 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/W | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
N/Y | 0.9775 | likely_pathogenic | 0.9776 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.766670733 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.