Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5064 | 15415;15416;15417 | chr2:178734734;178734733;178734732 | chr2:179599461;179599460;179599459 |
N2AB | 4747 | 14464;14465;14466 | chr2:178734734;178734733;178734732 | chr2:179599461;179599460;179599459 |
N2A | 3820 | 11683;11684;11685 | chr2:178734734;178734733;178734732 | chr2:179599461;179599460;179599459 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.001 | N | 0.38 | 0.129 | 0.17258766438 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1125 | likely_benign | 0.1022 | benign | -0.691 | Destabilizing | 0.072 | N | 0.548 | neutral | None | None | None | None | N |
S/C | 0.1781 | likely_benign | 0.1912 | benign | -0.407 | Destabilizing | 0.883 | D | 0.639 | neutral | D | 0.617695089 | None | None | N |
S/D | 0.5688 | likely_pathogenic | 0.4999 | ambiguous | 0.031 | Stabilizing | 0.157 | N | 0.455 | neutral | None | None | None | None | N |
S/E | 0.7095 | likely_pathogenic | 0.6182 | pathogenic | -0.028 | Destabilizing | 0.272 | N | 0.449 | neutral | None | None | None | None | N |
S/F | 0.2031 | likely_benign | 0.1952 | benign | -1.111 | Destabilizing | 0.726 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/G | 0.1353 | likely_benign | 0.1298 | benign | -0.864 | Destabilizing | 0.22 | N | 0.51 | neutral | D | 0.64023221 | None | None | N |
S/H | 0.3349 | likely_benign | 0.3212 | benign | -1.314 | Destabilizing | 0.909 | D | 0.646 | neutral | None | None | None | None | N |
S/I | 0.1805 | likely_benign | 0.1716 | benign | -0.353 | Destabilizing | 0.331 | N | 0.684 | prob.neutral | D | 0.554732472 | None | None | N |
S/K | 0.7378 | likely_pathogenic | 0.6416 | pathogenic | -0.633 | Destabilizing | 0.272 | N | 0.458 | neutral | None | None | None | None | N |
S/L | 0.1308 | likely_benign | 0.1296 | benign | -0.353 | Destabilizing | 0.157 | N | 0.576 | neutral | None | None | None | None | N |
S/M | 0.2296 | likely_benign | 0.2292 | benign | -0.035 | Destabilizing | 0.909 | D | 0.633 | neutral | None | None | None | None | N |
S/N | 0.149 | likely_benign | 0.1447 | benign | -0.392 | Destabilizing | 0.001 | N | 0.38 | neutral | N | 0.509599753 | None | None | N |
S/P | 0.9235 | likely_pathogenic | 0.9234 | pathogenic | -0.435 | Destabilizing | 0.726 | D | 0.647 | neutral | None | None | None | None | N |
S/Q | 0.5794 | likely_pathogenic | 0.5127 | ambiguous | -0.62 | Destabilizing | 0.726 | D | 0.507 | neutral | None | None | None | None | N |
S/R | 0.6011 | likely_pathogenic | 0.5076 | ambiguous | -0.417 | Destabilizing | 0.497 | N | 0.643 | neutral | N | 0.510306457 | None | None | N |
S/T | 0.0741 | likely_benign | 0.0753 | benign | -0.499 | Destabilizing | 0.001 | N | 0.363 | neutral | N | 0.503103606 | None | None | N |
S/V | 0.2089 | likely_benign | 0.1956 | benign | -0.435 | Destabilizing | 0.396 | N | 0.61 | neutral | None | None | None | None | N |
S/W | 0.476 | ambiguous | 0.4684 | ambiguous | -1.057 | Destabilizing | 0.968 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/Y | 0.2282 | likely_benign | 0.22 | benign | -0.811 | Destabilizing | 0.726 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.