Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5066 | 15421;15422;15423 | chr2:178734728;178734727;178734726 | chr2:179599455;179599454;179599453 |
N2AB | 4749 | 14470;14471;14472 | chr2:178734728;178734727;178734726 | chr2:179599455;179599454;179599453 |
N2A | 3822 | 11689;11690;11691 | chr2:178734728;178734727;178734726 | chr2:179599455;179599454;179599453 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs756793304 | -0.771 | 0.896 | D | 0.562 | 0.403 | 0.300110245524 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.91E-05 | 0 |
S/G | rs756793304 | -0.771 | 0.896 | D | 0.562 | 0.403 | 0.300110245524 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
S/G | rs756793304 | -0.771 | 0.896 | D | 0.562 | 0.403 | 0.300110245524 | gnomAD-4.0.0 | 4.96147E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.44727E-05 | 0 | 6.40841E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0948 | likely_benign | 0.0953 | benign | -0.558 | Destabilizing | 0.702 | D | 0.549 | neutral | None | None | None | None | N |
S/C | 0.1695 | likely_benign | 0.1731 | benign | -0.251 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.733128236 | None | None | N |
S/D | 0.5168 | ambiguous | 0.5166 | ambiguous | -0.242 | Destabilizing | 0.851 | D | 0.531 | neutral | None | None | None | None | N |
S/E | 0.6482 | likely_pathogenic | 0.6427 | pathogenic | -0.336 | Destabilizing | 0.919 | D | 0.549 | neutral | None | None | None | None | N |
S/F | 0.1791 | likely_benign | 0.1912 | benign | -1.242 | Destabilizing | 0.988 | D | 0.798 | deleterious | None | None | None | None | N |
S/G | 0.1311 | likely_benign | 0.1299 | benign | -0.655 | Destabilizing | 0.896 | D | 0.562 | neutral | D | 0.622211869 | None | None | N |
S/H | 0.4006 | ambiguous | 0.3793 | ambiguous | -1.318 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/I | 0.199 | likely_benign | 0.2033 | benign | -0.423 | Destabilizing | 0.968 | D | 0.793 | deleterious | D | 0.560816177 | None | None | N |
S/K | 0.7672 | likely_pathogenic | 0.7426 | pathogenic | -0.468 | Destabilizing | 0.919 | D | 0.547 | neutral | None | None | None | None | N |
S/L | 0.1072 | likely_benign | 0.1089 | benign | -0.423 | Destabilizing | 0.851 | D | 0.741 | deleterious | None | None | None | None | N |
S/M | 0.2093 | likely_benign | 0.2242 | benign | 0.106 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/N | 0.148 | likely_benign | 0.1511 | benign | -0.212 | Destabilizing | 0.103 | N | 0.407 | neutral | D | 0.541392066 | None | None | N |
S/P | 0.5899 | likely_pathogenic | 0.5342 | ambiguous | -0.442 | Destabilizing | 0.988 | D | 0.744 | deleterious | None | None | None | None | N |
S/Q | 0.5612 | ambiguous | 0.539 | ambiguous | -0.569 | Destabilizing | 0.988 | D | 0.6 | neutral | None | None | None | None | N |
S/R | 0.6865 | likely_pathogenic | 0.6336 | pathogenic | -0.252 | Destabilizing | 0.984 | D | 0.735 | prob.delet. | N | 0.511377741 | None | None | N |
S/T | 0.0717 | likely_benign | 0.0771 | benign | -0.303 | Destabilizing | 0.046 | N | 0.265 | neutral | N | 0.494789785 | None | None | N |
S/V | 0.1888 | likely_benign | 0.1939 | benign | -0.442 | Destabilizing | 0.851 | D | 0.753 | deleterious | None | None | None | None | N |
S/W | 0.4448 | ambiguous | 0.4313 | ambiguous | -1.207 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/Y | 0.231 | likely_benign | 0.2356 | benign | -0.93 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.