Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5067 | 15424;15425;15426 | chr2:178734725;178734724;178734723 | chr2:179599452;179599451;179599450 |
N2AB | 4750 | 14473;14474;14475 | chr2:178734725;178734724;178734723 | chr2:179599452;179599451;179599450 |
N2A | 3823 | 11692;11693;11694 | chr2:178734725;178734724;178734723 | chr2:179599452;179599451;179599450 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1560840708 | None | 0.117 | N | 0.749 | 0.227 | 0.339793275041 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs1560840708 | None | 0.117 | N | 0.749 | 0.227 | 0.339793275041 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1560840708 | None | 0.117 | N | 0.749 | 0.227 | 0.339793275041 | gnomAD-4.0.0 | 1.11672E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52739E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0571 | likely_benign | 0.0532 | benign | -1.36 | Destabilizing | None | N | 0.161 | neutral | N | 0.448903 | None | None | N |
T/C | 0.3998 | ambiguous | 0.3806 | ambiguous | -1.115 | Destabilizing | 0.001 | N | 0.441 | neutral | None | None | None | None | N |
T/D | 0.8546 | likely_pathogenic | 0.7424 | pathogenic | -1.454 | Destabilizing | 0.149 | N | 0.726 | prob.delet. | None | None | None | None | N |
T/E | 0.785 | likely_pathogenic | 0.6678 | pathogenic | -1.25 | Destabilizing | 0.149 | N | 0.713 | prob.delet. | None | None | None | None | N |
T/F | 0.6674 | likely_pathogenic | 0.6049 | pathogenic | -1.217 | Destabilizing | 0.555 | D | 0.766 | deleterious | None | None | None | None | N |
T/G | 0.2459 | likely_benign | 0.1897 | benign | -1.761 | Destabilizing | 0.035 | N | 0.648 | neutral | None | None | None | None | N |
T/H | 0.7324 | likely_pathogenic | 0.6305 | pathogenic | -1.856 | Destabilizing | 0.824 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/I | 0.4151 | ambiguous | 0.3614 | ambiguous | -0.303 | Destabilizing | 0.117 | N | 0.749 | deleterious | N | 0.496054513 | None | None | N |
T/K | 0.7615 | likely_pathogenic | 0.6507 | pathogenic | -0.474 | Destabilizing | 0.081 | N | 0.71 | prob.delet. | None | None | None | None | N |
T/L | 0.2718 | likely_benign | 0.2276 | benign | -0.303 | Destabilizing | 0.081 | N | 0.641 | neutral | None | None | None | None | N |
T/M | 0.1541 | likely_benign | 0.1335 | benign | -0.257 | Destabilizing | 0.555 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/N | 0.4358 | ambiguous | 0.3141 | benign | -1.212 | Destabilizing | 0.062 | N | 0.689 | prob.neutral | D | 0.547080895 | None | None | N |
T/P | 0.8137 | likely_pathogenic | 0.7232 | pathogenic | -0.626 | Destabilizing | 0.317 | N | 0.764 | deleterious | D | 0.547251361 | None | None | N |
T/Q | 0.6447 | likely_pathogenic | 0.539 | ambiguous | -1.025 | Destabilizing | 0.38 | N | 0.75 | deleterious | None | None | None | None | N |
T/R | 0.6483 | likely_pathogenic | 0.5408 | ambiguous | -0.677 | Destabilizing | 0.38 | N | 0.762 | deleterious | None | None | None | None | N |
T/S | 0.1255 | likely_benign | 0.1056 | benign | -1.507 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.452773827 | None | None | N |
T/V | 0.229 | likely_benign | 0.2021 | benign | -0.626 | Destabilizing | 0.081 | N | 0.591 | neutral | None | None | None | None | N |
T/W | 0.9081 | likely_pathogenic | 0.871 | pathogenic | -1.274 | Destabilizing | 0.935 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/Y | 0.7395 | likely_pathogenic | 0.6643 | pathogenic | -0.907 | Destabilizing | 0.555 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.