Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5070 | 15433;15434;15435 | chr2:178734716;178734715;178734714 | chr2:179599443;179599442;179599441 |
N2AB | 4753 | 14482;14483;14484 | chr2:178734716;178734715;178734714 | chr2:179599443;179599442;179599441 |
N2A | 3826 | 11701;11702;11703 | chr2:178734716;178734715;178734714 | chr2:179599443;179599442;179599441 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.454 | N | 0.346 | 0.059 | 0.476051820916 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2032 | likely_benign | 0.1723 | benign | -1.308 | Destabilizing | 0.022 | N | 0.077 | neutral | N | 0.496622385 | None | None | N |
V/C | 0.7512 | likely_pathogenic | 0.7217 | pathogenic | -0.99 | Destabilizing | 0.991 | D | 0.452 | neutral | None | None | None | None | N |
V/D | 0.404 | ambiguous | 0.3413 | ambiguous | -0.874 | Destabilizing | 0.801 | D | 0.559 | neutral | N | 0.490463026 | None | None | N |
V/E | 0.3035 | likely_benign | 0.2806 | benign | -0.876 | Destabilizing | 0.842 | D | 0.527 | neutral | None | None | None | None | N |
V/F | 0.1539 | likely_benign | 0.137 | benign | -0.957 | Destabilizing | 0.934 | D | 0.483 | neutral | N | 0.494708491 | None | None | N |
V/G | 0.2868 | likely_benign | 0.2559 | benign | -1.615 | Destabilizing | 0.625 | D | 0.559 | neutral | N | 0.49896564 | None | None | N |
V/H | 0.4898 | ambiguous | 0.4503 | ambiguous | -1.091 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
V/I | 0.0731 | likely_benign | 0.0674 | benign | -0.576 | Destabilizing | 0.012 | N | 0.159 | neutral | N | 0.418084727 | None | None | N |
V/K | 0.3314 | likely_benign | 0.3189 | benign | -1.026 | Destabilizing | 0.842 | D | 0.545 | neutral | None | None | None | None | N |
V/L | 0.162 | likely_benign | 0.1405 | benign | -0.576 | Destabilizing | 0.454 | N | 0.346 | neutral | N | 0.482950403 | None | None | N |
V/M | 0.1227 | likely_benign | 0.1121 | benign | -0.523 | Destabilizing | 0.949 | D | 0.423 | neutral | None | None | None | None | N |
V/N | 0.2616 | likely_benign | 0.209 | benign | -0.837 | Destabilizing | 0.949 | D | 0.567 | neutral | None | None | None | None | N |
V/P | 0.8832 | likely_pathogenic | 0.8564 | pathogenic | -0.784 | Destabilizing | 0.974 | D | 0.534 | neutral | None | None | None | None | N |
V/Q | 0.2965 | likely_benign | 0.2812 | benign | -0.997 | Destabilizing | 0.974 | D | 0.541 | neutral | None | None | None | None | N |
V/R | 0.3043 | likely_benign | 0.2938 | benign | -0.552 | Destabilizing | 0.974 | D | 0.576 | neutral | None | None | None | None | N |
V/S | 0.2106 | likely_benign | 0.1758 | benign | -1.412 | Destabilizing | 0.08 | N | 0.22 | neutral | None | None | None | None | N |
V/T | 0.1529 | likely_benign | 0.1368 | benign | -1.303 | Destabilizing | 0.067 | N | 0.125 | neutral | None | None | None | None | N |
V/W | 0.7992 | likely_pathogenic | 0.7758 | pathogenic | -1.109 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
V/Y | 0.5152 | ambiguous | 0.4813 | ambiguous | -0.814 | Destabilizing | 0.991 | D | 0.478 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.