Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5076 | 15451;15452;15453 | chr2:178734598;178734597;178734596 | chr2:179599325;179599324;179599323 |
N2AB | 4759 | 14500;14501;14502 | chr2:178734598;178734597;178734596 | chr2:179599325;179599324;179599323 |
N2A | 3832 | 11719;11720;11721 | chr2:178734598;178734597;178734596 | chr2:179599325;179599324;179599323 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.984 | N | 0.627 | 0.275 | 0.679362012665 | gnomAD-4.0.0 | 1.71952E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.05308E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0739 | likely_benign | 0.0711 | benign | -0.436 | Destabilizing | 0.103 | N | 0.14 | neutral | N | 0.499811849 | None | None | N |
S/C | 0.1041 | likely_benign | 0.1 | benign | -0.343 | Destabilizing | 0.059 | N | 0.329 | neutral | D | 0.60506773 | None | None | N |
S/D | 0.4977 | ambiguous | 0.4121 | ambiguous | 0.661 | Stabilizing | 0.919 | D | 0.458 | neutral | None | None | None | None | N |
S/E | 0.5201 | ambiguous | 0.4446 | ambiguous | 0.624 | Stabilizing | 0.919 | D | 0.453 | neutral | None | None | None | None | N |
S/F | 0.1451 | likely_benign | 0.12 | benign | -0.879 | Destabilizing | 0.984 | D | 0.627 | neutral | N | 0.503842155 | None | None | N |
S/G | 0.132 | likely_benign | 0.1171 | benign | -0.613 | Destabilizing | 0.851 | D | 0.447 | neutral | None | None | None | None | N |
S/H | 0.3088 | likely_benign | 0.2534 | benign | -1.026 | Destabilizing | 0.999 | D | 0.518 | neutral | None | None | None | None | N |
S/I | 0.1292 | likely_benign | 0.1161 | benign | -0.091 | Destabilizing | 0.976 | D | 0.566 | neutral | None | None | None | None | N |
S/K | 0.6147 | likely_pathogenic | 0.4918 | ambiguous | -0.238 | Destabilizing | 0.919 | D | 0.452 | neutral | None | None | None | None | N |
S/L | 0.091 | likely_benign | 0.0817 | benign | -0.091 | Destabilizing | 0.851 | D | 0.523 | neutral | None | None | None | None | N |
S/M | 0.1885 | likely_benign | 0.1656 | benign | -0.068 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
S/N | 0.1818 | likely_benign | 0.147 | benign | -0.152 | Destabilizing | 0.919 | D | 0.486 | neutral | None | None | None | None | N |
S/P | 0.9356 | likely_pathogenic | 0.8913 | pathogenic | -0.174 | Destabilizing | 0.984 | D | 0.527 | neutral | N | 0.503619049 | None | None | N |
S/Q | 0.4452 | ambiguous | 0.3696 | ambiguous | -0.249 | Destabilizing | 0.988 | D | 0.492 | neutral | None | None | None | None | N |
S/R | 0.4804 | ambiguous | 0.366 | ambiguous | -0.198 | Destabilizing | 0.976 | D | 0.532 | neutral | None | None | None | None | N |
S/T | 0.0668 | likely_benign | 0.0671 | benign | -0.247 | Destabilizing | 0.103 | N | 0.205 | neutral | N | 0.477903847 | None | None | N |
S/V | 0.1133 | likely_benign | 0.1044 | benign | -0.174 | Destabilizing | 0.851 | D | 0.539 | neutral | None | None | None | None | N |
S/W | 0.372 | ambiguous | 0.3129 | benign | -0.888 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/Y | 0.1628 | likely_benign | 0.1351 | benign | -0.574 | Destabilizing | 0.995 | D | 0.638 | neutral | N | 0.497536234 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.