Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC509315502;15503;15504 chr2:178734547;178734546;178734545chr2:179599274;179599273;179599272
N2AB477614551;14552;14553 chr2:178734547;178734546;178734545chr2:179599274;179599273;179599272
N2A384911770;11771;11772 chr2:178734547;178734546;178734545chr2:179599274;179599273;179599272
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Ig-34
  • Domain position: 19
  • Structural Position: 29
  • Q(SASA): 0.4497
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I None None 0.001 N 0.242 0.1 0.26169431596 gnomAD-4.0.0 6.87004E-07 None None None None N None 0 0 None 0 0 None 0 0 9.02341E-07 0 0
L/V rs764663290 -0.815 None N 0.281 0.108 0.263140351381 gnomAD-2.1.1 2.47E-05 None None None None N None 0 0 None 0 0 None 1.71233E-04 None 0 9.06E-06 0
L/V rs764663290 -0.815 None N 0.281 0.108 0.263140351381 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/V rs764663290 -0.815 None N 0.281 0.108 0.263140351381 gnomAD-4.0.0 1.43052E-05 None None None None N None 0 0 None 0 0 None 0 0 7.6514E-06 1.55466E-04 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1886 likely_benign 0.136 benign -1.339 Destabilizing 0.055 N 0.383 neutral None None None None N
L/C 0.3725 ambiguous 0.3059 benign -0.815 Destabilizing 0.667 D 0.471 neutral None None None None N
L/D 0.5368 ambiguous 0.4268 ambiguous -0.846 Destabilizing 0.22 N 0.477 neutral None None None None N
L/E 0.242 likely_benign 0.2068 benign -0.876 Destabilizing 0.124 N 0.454 neutral None None None None N
L/F 0.0911 likely_benign 0.0776 benign -0.961 Destabilizing 0.001 N 0.297 neutral None None None None N
L/G 0.4831 ambiguous 0.3643 ambiguous -1.616 Destabilizing 0.22 N 0.465 neutral None None None None N
L/H 0.1405 likely_benign 0.117 benign -0.766 Destabilizing 0.001 N 0.47 neutral None None None None N
L/I 0.0657 likely_benign 0.0613 benign -0.675 Destabilizing 0.001 N 0.242 neutral N 0.416806214 None None N
L/K 0.1774 likely_benign 0.1482 benign -0.973 Destabilizing 0.124 N 0.476 neutral None None None None N
L/M 0.0851 likely_benign 0.081 benign -0.544 Destabilizing 0.497 N 0.441 neutral None None None None N
L/N 0.2632 likely_benign 0.202 benign -0.759 Destabilizing 0.22 N 0.481 neutral None None None None N
L/P 0.6735 likely_pathogenic 0.5307 ambiguous -0.864 Destabilizing 0.602 D 0.544 neutral N 0.514457906 None None N
L/Q 0.1089 likely_benign 0.09 benign -0.961 Destabilizing 0.008 N 0.423 neutral N 0.433241942 None None N
L/R 0.1336 likely_benign 0.107 benign -0.326 Destabilizing 0.175 N 0.512 neutral N 0.449565866 None None N
L/S 0.1699 likely_benign 0.1309 benign -1.299 Destabilizing 0.055 N 0.435 neutral None None None None N
L/T 0.1273 likely_benign 0.1021 benign -1.215 Destabilizing 0.004 N 0.294 neutral None None None None N
L/V 0.0632 likely_benign 0.057 benign -0.864 Destabilizing None N 0.281 neutral N 0.408512667 None None N
L/W 0.1854 likely_benign 0.1791 benign -1.004 Destabilizing 0.958 D 0.481 neutral None None None None N
L/Y 0.2197 likely_benign 0.1932 benign -0.794 Destabilizing 0.004 N 0.312 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.