Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5093 | 15502;15503;15504 | chr2:178734547;178734546;178734545 | chr2:179599274;179599273;179599272 |
N2AB | 4776 | 14551;14552;14553 | chr2:178734547;178734546;178734545 | chr2:179599274;179599273;179599272 |
N2A | 3849 | 11770;11771;11772 | chr2:178734547;178734546;178734545 | chr2:179599274;179599273;179599272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.001 | N | 0.242 | 0.1 | 0.26169431596 | gnomAD-4.0.0 | 6.87004E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02341E-07 | 0 | 0 |
L/V | rs764663290 | -0.815 | None | N | 0.281 | 0.108 | 0.263140351381 | gnomAD-2.1.1 | 2.47E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.71233E-04 | None | 0 | 9.06E-06 | 0 |
L/V | rs764663290 | -0.815 | None | N | 0.281 | 0.108 | 0.263140351381 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs764663290 | -0.815 | None | N | 0.281 | 0.108 | 0.263140351381 | gnomAD-4.0.0 | 1.43052E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.6514E-06 | 1.55466E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1886 | likely_benign | 0.136 | benign | -1.339 | Destabilizing | 0.055 | N | 0.383 | neutral | None | None | None | None | N |
L/C | 0.3725 | ambiguous | 0.3059 | benign | -0.815 | Destabilizing | 0.667 | D | 0.471 | neutral | None | None | None | None | N |
L/D | 0.5368 | ambiguous | 0.4268 | ambiguous | -0.846 | Destabilizing | 0.22 | N | 0.477 | neutral | None | None | None | None | N |
L/E | 0.242 | likely_benign | 0.2068 | benign | -0.876 | Destabilizing | 0.124 | N | 0.454 | neutral | None | None | None | None | N |
L/F | 0.0911 | likely_benign | 0.0776 | benign | -0.961 | Destabilizing | 0.001 | N | 0.297 | neutral | None | None | None | None | N |
L/G | 0.4831 | ambiguous | 0.3643 | ambiguous | -1.616 | Destabilizing | 0.22 | N | 0.465 | neutral | None | None | None | None | N |
L/H | 0.1405 | likely_benign | 0.117 | benign | -0.766 | Destabilizing | 0.001 | N | 0.47 | neutral | None | None | None | None | N |
L/I | 0.0657 | likely_benign | 0.0613 | benign | -0.675 | Destabilizing | 0.001 | N | 0.242 | neutral | N | 0.416806214 | None | None | N |
L/K | 0.1774 | likely_benign | 0.1482 | benign | -0.973 | Destabilizing | 0.124 | N | 0.476 | neutral | None | None | None | None | N |
L/M | 0.0851 | likely_benign | 0.081 | benign | -0.544 | Destabilizing | 0.497 | N | 0.441 | neutral | None | None | None | None | N |
L/N | 0.2632 | likely_benign | 0.202 | benign | -0.759 | Destabilizing | 0.22 | N | 0.481 | neutral | None | None | None | None | N |
L/P | 0.6735 | likely_pathogenic | 0.5307 | ambiguous | -0.864 | Destabilizing | 0.602 | D | 0.544 | neutral | N | 0.514457906 | None | None | N |
L/Q | 0.1089 | likely_benign | 0.09 | benign | -0.961 | Destabilizing | 0.008 | N | 0.423 | neutral | N | 0.433241942 | None | None | N |
L/R | 0.1336 | likely_benign | 0.107 | benign | -0.326 | Destabilizing | 0.175 | N | 0.512 | neutral | N | 0.449565866 | None | None | N |
L/S | 0.1699 | likely_benign | 0.1309 | benign | -1.299 | Destabilizing | 0.055 | N | 0.435 | neutral | None | None | None | None | N |
L/T | 0.1273 | likely_benign | 0.1021 | benign | -1.215 | Destabilizing | 0.004 | N | 0.294 | neutral | None | None | None | None | N |
L/V | 0.0632 | likely_benign | 0.057 | benign | -0.864 | Destabilizing | None | N | 0.281 | neutral | N | 0.408512667 | None | None | N |
L/W | 0.1854 | likely_benign | 0.1791 | benign | -1.004 | Destabilizing | 0.958 | D | 0.481 | neutral | None | None | None | None | N |
L/Y | 0.2197 | likely_benign | 0.1932 | benign | -0.794 | Destabilizing | 0.004 | N | 0.312 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.