Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC509415505;15506;15507 chr2:178734544;178734543;178734542chr2:179599271;179599270;179599269
N2AB477714554;14555;14556 chr2:178734544;178734543;178734542chr2:179599271;179599270;179599269
N2A385011773;11774;11775 chr2:178734544;178734543;178734542chr2:179599271;179599270;179599269
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-34
  • Domain position: 20
  • Structural Position: 30
  • Q(SASA): 0.0957
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 1.0 D 0.781 0.47 0.772391555924 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0
L/R None None 1.0 D 0.903 0.877 0.922268766853 gnomAD-4.0.0 1.60397E-06 None None None None N None 0 0 None 0 0 None 0 0 0 1.44953E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9587 likely_pathogenic 0.9302 pathogenic -2.771 Highly Destabilizing 0.999 D 0.754 deleterious None None None None N
L/C 0.9405 likely_pathogenic 0.9112 pathogenic -1.854 Destabilizing 1.0 D 0.841 deleterious None None None None N
L/D 0.999 likely_pathogenic 0.9979 pathogenic -3.392 Highly Destabilizing 1.0 D 0.908 deleterious None None None None N
L/E 0.9928 likely_pathogenic 0.9848 pathogenic -3.158 Highly Destabilizing 1.0 D 0.891 deleterious None None None None N
L/F 0.1948 likely_benign 0.1726 benign -1.795 Destabilizing 1.0 D 0.781 deleterious D 0.541062239 None None N
L/G 0.9914 likely_pathogenic 0.9825 pathogenic -3.28 Highly Destabilizing 1.0 D 0.891 deleterious None None None None N
L/H 0.947 likely_pathogenic 0.8963 pathogenic -2.657 Highly Destabilizing 1.0 D 0.877 deleterious D 0.814917657 None None N
L/I 0.2349 likely_benign 0.2177 benign -1.269 Destabilizing 0.999 D 0.574 neutral D 0.623064247 None None N
L/K 0.9858 likely_pathogenic 0.9707 pathogenic -2.236 Highly Destabilizing 1.0 D 0.906 deleterious None None None None N
L/M 0.3028 likely_benign 0.2475 benign -1.059 Destabilizing 1.0 D 0.732 prob.delet. None None None None N
L/N 0.9946 likely_pathogenic 0.9878 pathogenic -2.614 Highly Destabilizing 1.0 D 0.909 deleterious None None None None N
L/P 0.9949 likely_pathogenic 0.9914 pathogenic -1.757 Destabilizing 1.0 D 0.906 deleterious D 0.814917657 None None N
L/Q 0.9467 likely_pathogenic 0.8812 pathogenic -2.509 Highly Destabilizing 1.0 D 0.915 deleterious None None None None N
L/R 0.966 likely_pathogenic 0.9326 pathogenic -1.911 Destabilizing 1.0 D 0.903 deleterious D 0.814917657 None None N
L/S 0.9875 likely_pathogenic 0.9733 pathogenic -3.212 Highly Destabilizing 1.0 D 0.901 deleterious None None None None N
L/T 0.9776 likely_pathogenic 0.9545 pathogenic -2.841 Highly Destabilizing 1.0 D 0.849 deleterious None None None None N
L/V 0.3609 ambiguous 0.3017 benign -1.757 Destabilizing 0.999 D 0.591 neutral D 0.665077619 None None N
L/W 0.7589 likely_pathogenic 0.6903 pathogenic -2.179 Highly Destabilizing 1.0 D 0.869 deleterious None None None None N
L/Y 0.8346 likely_pathogenic 0.7718 pathogenic -1.907 Destabilizing 1.0 D 0.844 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.