Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5095 | 15508;15509;15510 | chr2:178734541;178734540;178734539 | chr2:179599268;179599267;179599266 |
N2AB | 4778 | 14557;14558;14559 | chr2:178734541;178734540;178734539 | chr2:179599268;179599267;179599266 |
N2A | 3851 | 11776;11777;11778 | chr2:178734541;178734540;178734539 | chr2:179599268;179599267;179599266 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.165 | N | 0.524 | 0.226 | 0.212008924253 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/R | rs2081098001 | None | 0.324 | N | 0.489 | 0.314 | 0.223847106136 | gnomAD-4.0.0 | 1.50954E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.98325E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2876 | likely_benign | 0.2249 | benign | -0.673 | Destabilizing | 0.207 | N | 0.467 | neutral | None | None | None | None | N |
Q/C | 0.5468 | ambiguous | 0.446 | ambiguous | -0.055 | Destabilizing | 0.981 | D | 0.612 | neutral | None | None | None | None | N |
Q/D | 0.4908 | ambiguous | 0.3689 | ambiguous | -0.699 | Destabilizing | 0.116 | N | 0.479 | neutral | None | None | None | None | N |
Q/E | 0.0862 | likely_benign | 0.0833 | benign | -0.565 | Destabilizing | 0.001 | N | 0.268 | neutral | N | 0.404789091 | None | None | N |
Q/F | 0.6266 | likely_pathogenic | 0.5539 | ambiguous | -0.139 | Destabilizing | 0.69 | D | 0.603 | neutral | None | None | None | None | N |
Q/G | 0.3652 | ambiguous | 0.2807 | benign | -1.071 | Destabilizing | 0.388 | N | 0.539 | neutral | None | None | None | None | N |
Q/H | 0.172 | likely_benign | 0.1442 | benign | -0.847 | Destabilizing | 0.001 | N | 0.373 | neutral | N | 0.496167006 | None | None | N |
Q/I | 0.4006 | ambiguous | 0.3429 | ambiguous | 0.366 | Stabilizing | 0.818 | D | 0.609 | neutral | None | None | None | None | N |
Q/K | 0.1129 | likely_benign | 0.102 | benign | -0.6 | Destabilizing | 0.165 | N | 0.524 | neutral | N | 0.500179425 | None | None | N |
Q/L | 0.1539 | likely_benign | 0.124 | benign | 0.366 | Stabilizing | 0.324 | N | 0.539 | neutral | N | 0.502026202 | None | None | N |
Q/M | 0.398 | ambiguous | 0.3513 | ambiguous | 0.699 | Stabilizing | 0.932 | D | 0.545 | neutral | None | None | None | None | N |
Q/N | 0.3311 | likely_benign | 0.2602 | benign | -1.116 | Destabilizing | 0.241 | N | 0.463 | neutral | None | None | None | None | N |
Q/P | 0.5282 | ambiguous | 0.3006 | benign | 0.051 | Stabilizing | 0.492 | N | 0.563 | neutral | N | 0.508801056 | None | None | N |
Q/R | 0.1049 | likely_benign | 0.0916 | benign | -0.593 | Destabilizing | 0.324 | N | 0.489 | neutral | N | 0.491038541 | None | None | N |
Q/S | 0.271 | likely_benign | 0.2097 | benign | -1.221 | Destabilizing | 0.207 | N | 0.481 | neutral | None | None | None | None | N |
Q/T | 0.2196 | likely_benign | 0.1756 | benign | -0.894 | Destabilizing | 0.563 | D | 0.486 | neutral | None | None | None | None | N |
Q/V | 0.2715 | likely_benign | 0.2213 | benign | 0.051 | Stabilizing | 0.563 | D | 0.565 | neutral | None | None | None | None | N |
Q/W | 0.4532 | ambiguous | 0.3939 | ambiguous | -0.066 | Destabilizing | 0.981 | D | 0.623 | neutral | None | None | None | None | N |
Q/Y | 0.3687 | ambiguous | 0.3236 | benign | 0.142 | Stabilizing | 0.527 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.