Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5097 | 15514;15515;15516 | chr2:178734535;178734534;178734533 | chr2:179599262;179599261;179599260 |
N2AB | 4780 | 14563;14564;14565 | chr2:178734535;178734534;178734533 | chr2:179599262;179599261;179599260 |
N2A | 3853 | 11782;11783;11784 | chr2:178734535;178734534;178734533 | chr2:179599262;179599261;179599260 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1230501060 | -1.425 | 0.999 | D | 0.731 | 0.575 | 0.655633844924 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1230501060 | -1.425 | 0.999 | D | 0.731 | 0.575 | 0.655633844924 | gnomAD-4.0.0 | 1.59678E-06 | None | None | None | None | I | None | 0 | 2.29347E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3122 | likely_benign | 0.2463 | benign | -1.235 | Destabilizing | 0.998 | D | 0.656 | neutral | D | 0.545961201 | None | None | I |
E/C | 0.9546 | likely_pathogenic | 0.9302 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/D | 0.498 | ambiguous | 0.3763 | ambiguous | -1.179 | Destabilizing | 0.434 | N | 0.261 | neutral | D | 0.591157969 | None | None | I |
E/F | 0.9014 | likely_pathogenic | 0.8623 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/G | 0.5654 | likely_pathogenic | 0.4514 | ambiguous | -1.604 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.60620863 | None | None | I |
E/H | 0.7118 | likely_pathogenic | 0.5981 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
E/I | 0.5468 | ambiguous | 0.4799 | ambiguous | -0.211 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
E/K | 0.2816 | likely_benign | 0.2204 | benign | -0.74 | Destabilizing | 0.998 | D | 0.533 | neutral | N | 0.497687323 | None | None | I |
E/L | 0.6075 | likely_pathogenic | 0.5193 | ambiguous | -0.211 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/M | 0.5985 | likely_pathogenic | 0.5486 | ambiguous | 0.359 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
E/N | 0.6404 | likely_pathogenic | 0.5098 | ambiguous | -1.191 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/P | 0.9876 | likely_pathogenic | 0.9664 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/Q | 0.1919 | likely_benign | 0.1563 | benign | -1.077 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.510673167 | None | None | I |
E/R | 0.4558 | ambiguous | 0.3612 | ambiguous | -0.497 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/S | 0.4334 | ambiguous | 0.3506 | ambiguous | -1.612 | Destabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | I |
E/T | 0.4503 | ambiguous | 0.362 | ambiguous | -1.289 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
E/V | 0.3582 | ambiguous | 0.2939 | benign | -0.533 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.559519851 | None | None | I |
E/W | 0.9741 | likely_pathogenic | 0.9625 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/Y | 0.8658 | likely_pathogenic | 0.8055 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.