Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5098 | 15517;15518;15519 | chr2:178734532;178734531;178734530 | chr2:179599259;179599258;179599257 |
N2AB | 4781 | 14566;14567;14568 | chr2:178734532;178734531;178734530 | chr2:179599259;179599258;179599257 |
N2A | 3854 | 11785;11786;11787 | chr2:178734532;178734531;178734530 | chr2:179599259;179599258;179599257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1349400261 | -1.709 | 0.104 | D | 0.68 | 0.361 | 0.544432747571 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
V/A | rs1349400261 | -1.709 | 0.104 | D | 0.68 | 0.361 | 0.544432747571 | gnomAD-4.0.0 | 6.16535E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.10272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6218 | likely_pathogenic | 0.472 | ambiguous | -1.805 | Destabilizing | 0.104 | N | 0.68 | prob.neutral | D | 0.533333951 | None | None | N |
V/C | 0.8868 | likely_pathogenic | 0.8309 | pathogenic | -1.659 | Destabilizing | 0.968 | D | 0.783 | deleterious | None | None | None | None | N |
V/D | 0.9791 | likely_pathogenic | 0.9667 | pathogenic | -1.553 | Destabilizing | 0.667 | D | 0.868 | deleterious | D | 0.727294211 | None | None | N |
V/E | 0.9542 | likely_pathogenic | 0.9339 | pathogenic | -1.348 | Destabilizing | 0.726 | D | 0.843 | deleterious | None | None | None | None | N |
V/F | 0.2787 | likely_benign | 0.2099 | benign | -1.081 | Destabilizing | 0.497 | N | 0.833 | deleterious | D | 0.684270324 | None | None | N |
V/G | 0.8082 | likely_pathogenic | 0.7198 | pathogenic | -2.333 | Highly Destabilizing | 0.667 | D | 0.849 | deleterious | D | 0.705628519 | None | None | N |
V/H | 0.9705 | likely_pathogenic | 0.9487 | pathogenic | -1.996 | Destabilizing | 0.968 | D | 0.846 | deleterious | None | None | None | None | N |
V/I | 0.0549 | likely_benign | 0.0548 | benign | -0.355 | Destabilizing | None | N | 0.181 | neutral | D | 0.527445535 | None | None | N |
V/K | 0.9619 | likely_pathogenic | 0.9362 | pathogenic | -1.303 | Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
V/L | 0.1569 | likely_benign | 0.1231 | benign | -0.355 | Destabilizing | 0.009 | N | 0.397 | neutral | D | 0.537371855 | None | None | N |
V/M | 0.2335 | likely_benign | 0.1694 | benign | -0.615 | Destabilizing | 0.033 | N | 0.477 | neutral | None | None | None | None | N |
V/N | 0.9145 | likely_pathogenic | 0.8543 | pathogenic | -1.535 | Destabilizing | 0.89 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.9515 | likely_pathogenic | 0.9183 | pathogenic | -0.809 | Destabilizing | 0.89 | D | 0.844 | deleterious | None | None | None | None | N |
V/Q | 0.9481 | likely_pathogenic | 0.9176 | pathogenic | -1.364 | Destabilizing | 0.726 | D | 0.835 | deleterious | None | None | None | None | N |
V/R | 0.9403 | likely_pathogenic | 0.9031 | pathogenic | -1.252 | Destabilizing | 0.726 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.8404 | likely_pathogenic | 0.7411 | pathogenic | -2.314 | Highly Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | N |
V/T | 0.7051 | likely_pathogenic | 0.5761 | pathogenic | -1.945 | Destabilizing | 0.272 | N | 0.707 | prob.neutral | None | None | None | None | N |
V/W | 0.9478 | likely_pathogenic | 0.9267 | pathogenic | -1.434 | Destabilizing | 0.968 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.8249 | likely_pathogenic | 0.7589 | pathogenic | -1.055 | Destabilizing | 0.726 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.