Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5103 | 15532;15533;15534 | chr2:178734517;178734516;178734515 | chr2:179599244;179599243;179599242 |
N2AB | 4786 | 14581;14582;14583 | chr2:178734517;178734516;178734515 | chr2:179599244;179599243;179599242 |
N2A | 3859 | 11800;11801;11802 | chr2:178734517;178734516;178734515 | chr2:179599244;179599243;179599242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.694 | 0.507 | 0.82247249236 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 0 |
P/T | None | None | 1.0 | D | 0.677 | 0.461 | 0.60416271137 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2618 | likely_benign | 0.3075 | benign | -0.385 | Destabilizing | 1.0 | D | 0.671 | neutral | D | 0.577567415 | None | None | I |
P/C | 0.8544 | likely_pathogenic | 0.8904 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
P/D | 0.7621 | likely_pathogenic | 0.7847 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/E | 0.671 | likely_pathogenic | 0.7024 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
P/F | 0.8254 | likely_pathogenic | 0.8661 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
P/G | 0.6563 | likely_pathogenic | 0.7065 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/H | 0.5323 | ambiguous | 0.5704 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
P/I | 0.6125 | likely_pathogenic | 0.6867 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/K | 0.7075 | likely_pathogenic | 0.7551 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
P/L | 0.3409 | ambiguous | 0.3892 | ambiguous | -0.213 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | D | 0.609220365 | None | None | I |
P/M | 0.6587 | likely_pathogenic | 0.717 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
P/N | 0.6157 | likely_pathogenic | 0.6494 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/Q | 0.4728 | ambiguous | 0.5308 | ambiguous | -0.335 | Destabilizing | 1.0 | D | 0.647 | neutral | D | 0.53713661 | None | None | I |
P/R | 0.5349 | ambiguous | 0.5847 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.575633039 | None | None | I |
P/S | 0.3906 | ambiguous | 0.4255 | ambiguous | -0.467 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.579482874 | None | None | I |
P/T | 0.3311 | likely_benign | 0.3723 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.554460262 | None | None | I |
P/V | 0.4955 | ambiguous | 0.5687 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/W | 0.9389 | likely_pathogenic | 0.9522 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/Y | 0.8132 | likely_pathogenic | 0.8461 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.