Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5107 | 15544;15545;15546 | chr2:178734505;178734504;178734503 | chr2:179599232;179599231;179599230 |
N2AB | 4790 | 14593;14594;14595 | chr2:178734505;178734504;178734503 | chr2:179599232;179599231;179599230 |
N2A | 3863 | 11812;11813;11814 | chr2:178734505;178734504;178734503 | chr2:179599232;179599231;179599230 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs748973546 | 0.643 | 0.317 | N | 0.595 | 0.395 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.5E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/I | rs748973546 | 0.643 | 0.317 | N | 0.595 | 0.395 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
S/I | rs748973546 | 0.643 | 0.317 | N | 0.595 | 0.395 | None | gnomAD-4.0.0 | 2.72695E-05 | None | None | None | None | N | None | 1.33472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.64493E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0852 | likely_benign | 0.0958 | benign | -0.468 | Destabilizing | 0.035 | N | 0.482 | neutral | None | None | None | None | N |
S/C | 0.1009 | likely_benign | 0.1128 | benign | -0.278 | Destabilizing | 0.915 | D | 0.584 | neutral | D | 0.712689511 | None | None | N |
S/D | 0.4968 | ambiguous | 0.4974 | ambiguous | -0.061 | Destabilizing | 0.081 | N | 0.549 | neutral | None | None | None | None | N |
S/E | 0.6171 | likely_pathogenic | 0.5921 | pathogenic | 0.015 | Stabilizing | 0.081 | N | 0.546 | neutral | None | None | None | None | N |
S/F | 0.2067 | likely_benign | 0.2453 | benign | -0.594 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | N |
S/G | 0.0867 | likely_benign | 0.0992 | benign | -0.761 | Destabilizing | 0.027 | N | 0.536 | neutral | D | 0.710359801 | None | None | N |
S/H | 0.2608 | likely_benign | 0.235 | benign | -1.022 | Destabilizing | 0.38 | N | 0.603 | neutral | None | None | None | None | N |
S/I | 0.1226 | likely_benign | 0.1352 | benign | 0.221 | Stabilizing | 0.317 | N | 0.595 | neutral | N | 0.517427367 | None | None | N |
S/K | 0.6319 | likely_pathogenic | 0.5392 | ambiguous | -0.211 | Destabilizing | 0.035 | N | 0.532 | neutral | None | None | None | None | N |
S/L | 0.1076 | likely_benign | 0.1243 | benign | 0.221 | Stabilizing | 0.081 | N | 0.573 | neutral | None | None | None | None | N |
S/M | 0.166 | likely_benign | 0.1748 | benign | 0.081 | Stabilizing | 0.791 | D | 0.595 | neutral | None | None | None | None | N |
S/N | 0.1075 | likely_benign | 0.1139 | benign | -0.451 | Destabilizing | None | N | 0.191 | neutral | D | 0.558853695 | None | None | N |
S/P | 0.8925 | likely_pathogenic | 0.9166 | pathogenic | 0.026 | Stabilizing | 0.555 | D | 0.597 | neutral | None | None | None | None | N |
S/Q | 0.4031 | ambiguous | 0.3698 | ambiguous | -0.387 | Destabilizing | 0.38 | N | 0.58 | neutral | None | None | None | None | N |
S/R | 0.5159 | ambiguous | 0.404 | ambiguous | -0.265 | Destabilizing | None | N | 0.397 | neutral | N | 0.510488151 | None | None | N |
S/T | 0.0696 | likely_benign | 0.0717 | benign | -0.37 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.442204551 | None | None | N |
S/V | 0.1442 | likely_benign | 0.1598 | benign | 0.026 | Stabilizing | 0.081 | N | 0.567 | neutral | None | None | None | None | N |
S/W | 0.3717 | ambiguous | 0.3815 | ambiguous | -0.737 | Destabilizing | 0.935 | D | 0.671 | neutral | None | None | None | None | N |
S/Y | 0.1873 | likely_benign | 0.1989 | benign | -0.342 | Destabilizing | 0.791 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.