Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5114 | 15565;15566;15567 | chr2:178734484;178734483;178734482 | chr2:179599211;179599210;179599209 |
N2AB | 4797 | 14614;14615;14616 | chr2:178734484;178734483;178734482 | chr2:179599211;179599210;179599209 |
N2A | 3870 | 11833;11834;11835 | chr2:178734484;178734483;178734482 | chr2:179599211;179599210;179599209 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.007 | N | 0.167 | 0.248 | 0.176091768786 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1972 | likely_benign | 0.2415 | benign | -0.329 | Destabilizing | 0.037 | N | 0.178 | neutral | None | None | None | None | N |
Q/C | 0.783 | likely_pathogenic | 0.8457 | pathogenic | -0.009 | Destabilizing | 0.993 | D | 0.368 | neutral | None | None | None | None | N |
Q/D | 0.7291 | likely_pathogenic | 0.8015 | pathogenic | 0.299 | Stabilizing | 0.932 | D | 0.169 | neutral | None | None | None | None | N |
Q/E | 0.1229 | likely_benign | 0.1355 | benign | 0.33 | Stabilizing | 0.811 | D | 0.215 | neutral | N | 0.408006623 | None | None | N |
Q/F | 0.8213 | likely_pathogenic | 0.8885 | pathogenic | -0.302 | Destabilizing | 0.98 | D | 0.389 | neutral | None | None | None | None | N |
Q/G | 0.4443 | ambiguous | 0.5464 | ambiguous | -0.578 | Destabilizing | 0.737 | D | 0.337 | neutral | None | None | None | None | N |
Q/H | 0.3875 | ambiguous | 0.4729 | ambiguous | -0.242 | Destabilizing | 0.991 | D | 0.333 | neutral | D | 0.542480423 | None | None | N |
Q/I | 0.3618 | ambiguous | 0.4399 | ambiguous | 0.257 | Stabilizing | 0.773 | D | 0.367 | neutral | None | None | None | None | N |
Q/K | 0.1638 | likely_benign | 0.1752 | benign | 0.057 | Stabilizing | 0.811 | D | 0.21 | neutral | N | 0.478852348 | None | None | N |
Q/L | 0.1591 | likely_benign | 0.1843 | benign | 0.257 | Stabilizing | 0.514 | D | 0.303 | neutral | N | 0.466653008 | None | None | N |
Q/M | 0.3396 | likely_benign | 0.3858 | ambiguous | 0.282 | Stabilizing | 0.98 | D | 0.324 | neutral | None | None | None | None | N |
Q/N | 0.449 | ambiguous | 0.5358 | ambiguous | -0.446 | Destabilizing | 0.932 | D | 0.195 | neutral | None | None | None | None | N |
Q/P | 0.0876 | likely_benign | 0.1 | benign | 0.091 | Stabilizing | 0.007 | N | 0.167 | neutral | N | 0.407585469 | None | None | N |
Q/R | 0.2251 | likely_benign | 0.2349 | benign | 0.194 | Stabilizing | 0.912 | D | 0.218 | neutral | N | 0.501719533 | None | None | N |
Q/S | 0.3895 | ambiguous | 0.4694 | ambiguous | -0.505 | Destabilizing | 0.584 | D | 0.177 | neutral | None | None | None | None | N |
Q/T | 0.2776 | likely_benign | 0.3426 | ambiguous | -0.295 | Destabilizing | 0.037 | N | 0.176 | neutral | None | None | None | None | N |
Q/V | 0.253 | likely_benign | 0.3019 | benign | 0.091 | Stabilizing | 0.037 | N | 0.233 | neutral | None | None | None | None | N |
Q/W | 0.7932 | likely_pathogenic | 0.8533 | pathogenic | -0.235 | Destabilizing | 0.998 | D | 0.378 | neutral | None | None | None | None | N |
Q/Y | 0.6767 | likely_pathogenic | 0.7589 | pathogenic | 0.01 | Stabilizing | 0.993 | D | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.