Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5119 | 15580;15581;15582 | chr2:178734469;178734468;178734467 | chr2:179599196;179599195;179599194 |
N2AB | 4802 | 14629;14630;14631 | chr2:178734469;178734468;178734467 | chr2:179599196;179599195;179599194 |
N2A | 3875 | 11848;11849;11850 | chr2:178734469;178734468;178734467 | chr2:179599196;179599195;179599194 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1183767493 | None | 0.248 | N | 0.243 | 0.205 | 0.322230723748 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7525 | likely_pathogenic | 0.8435 | pathogenic | -0.1 | Destabilizing | 0.97 | D | 0.473 | neutral | None | None | None | None | N |
K/C | 0.9339 | likely_pathogenic | 0.9615 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
K/D | 0.8804 | likely_pathogenic | 0.9283 | pathogenic | -0.26 | Destabilizing | 0.942 | D | 0.477 | neutral | None | None | None | None | N |
K/E | 0.6401 | likely_pathogenic | 0.7552 | pathogenic | -0.274 | Destabilizing | 0.248 | N | 0.243 | neutral | N | 0.507973267 | None | None | N |
K/F | 0.9695 | likely_pathogenic | 0.9854 | pathogenic | -0.51 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
K/G | 0.7159 | likely_pathogenic | 0.8107 | pathogenic | -0.192 | Destabilizing | 0.985 | D | 0.462 | neutral | None | None | None | None | N |
K/H | 0.6868 | likely_pathogenic | 0.7753 | pathogenic | -0.257 | Destabilizing | 0.999 | D | 0.482 | neutral | None | None | None | None | N |
K/I | 0.8549 | likely_pathogenic | 0.9193 | pathogenic | 0.06 | Stabilizing | 0.989 | D | 0.539 | neutral | D | 0.540289257 | None | None | N |
K/L | 0.7722 | likely_pathogenic | 0.8524 | pathogenic | 0.06 | Stabilizing | 0.97 | D | 0.467 | neutral | None | None | None | None | N |
K/M | 0.7527 | likely_pathogenic | 0.838 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.484 | neutral | None | None | None | None | N |
K/N | 0.8245 | likely_pathogenic | 0.8931 | pathogenic | -0.223 | Destabilizing | 0.98 | D | 0.448 | neutral | N | 0.514070265 | None | None | N |
K/P | 0.755 | likely_pathogenic | 0.8395 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.48 | neutral | None | None | None | None | N |
K/Q | 0.3614 | ambiguous | 0.4707 | ambiguous | -0.311 | Destabilizing | 0.689 | D | 0.255 | neutral | N | 0.502240912 | None | None | N |
K/R | 0.0826 | likely_benign | 0.0947 | benign | -0.244 | Destabilizing | 0.961 | D | 0.436 | neutral | N | 0.453410554 | None | None | N |
K/S | 0.7675 | likely_pathogenic | 0.8518 | pathogenic | -0.57 | Destabilizing | 0.942 | D | 0.439 | neutral | None | None | None | None | N |
K/T | 0.6372 | likely_pathogenic | 0.7484 | pathogenic | -0.477 | Destabilizing | 0.248 | N | 0.319 | neutral | N | 0.512486931 | None | None | N |
K/V | 0.7697 | likely_pathogenic | 0.8586 | pathogenic | 0.027 | Stabilizing | 0.97 | D | 0.461 | neutral | None | None | None | None | N |
K/W | 0.9328 | likely_pathogenic | 0.9614 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
K/Y | 0.9161 | likely_pathogenic | 0.9486 | pathogenic | -0.294 | Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.