Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5125 | 15598;15599;15600 | chr2:178734451;178734450;178734449 | chr2:179599178;179599177;179599176 |
N2AB | 4808 | 14647;14648;14649 | chr2:178734451;178734450;178734449 | chr2:179599178;179599177;179599176 |
N2A | 3881 | 11866;11867;11868 | chr2:178734451;178734450;178734449 | chr2:179599178;179599177;179599176 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.484 | D | 0.635 | 0.337 | 0.478755181577 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0684 | likely_benign | 0.0749 | benign | -0.464 | Destabilizing | None | N | 0.262 | neutral | N | 0.505093142 | None | None | N |
S/C | 0.0918 | likely_benign | 0.0964 | benign | -0.325 | Destabilizing | 0.484 | N | 0.635 | neutral | D | 0.639462161 | None | None | N |
S/D | 0.4056 | ambiguous | 0.4685 | ambiguous | 0.526 | Stabilizing | 0.149 | N | 0.598 | neutral | None | None | None | None | N |
S/E | 0.4681 | ambiguous | 0.5273 | ambiguous | 0.458 | Stabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
S/F | 0.1133 | likely_benign | 0.1488 | benign | -0.991 | Destabilizing | 0.317 | N | 0.721 | prob.delet. | N | 0.512031569 | None | None | N |
S/G | 0.1046 | likely_benign | 0.1223 | benign | -0.601 | Destabilizing | 0.035 | N | 0.543 | neutral | None | None | None | None | N |
S/H | 0.2531 | likely_benign | 0.2821 | benign | -1.026 | Destabilizing | 0.935 | D | 0.63 | neutral | None | None | None | None | N |
S/I | 0.1265 | likely_benign | 0.1597 | benign | -0.23 | Destabilizing | 0.081 | N | 0.69 | prob.neutral | None | None | None | None | N |
S/K | 0.5726 | likely_pathogenic | 0.6503 | pathogenic | -0.364 | Destabilizing | 0.149 | N | 0.555 | neutral | None | None | None | None | N |
S/L | 0.0755 | likely_benign | 0.0867 | benign | -0.23 | Destabilizing | 0.001 | N | 0.458 | neutral | None | None | None | None | N |
S/M | 0.1562 | likely_benign | 0.1871 | benign | -0.146 | Destabilizing | 0.38 | N | 0.65 | neutral | None | None | None | None | N |
S/N | 0.1444 | likely_benign | 0.1719 | benign | -0.145 | Destabilizing | 0.149 | N | 0.612 | neutral | None | None | None | None | N |
S/P | 0.1915 | likely_benign | 0.2514 | benign | -0.278 | Destabilizing | 0.484 | N | 0.656 | neutral | N | 0.511441714 | None | None | N |
S/Q | 0.3786 | ambiguous | 0.4259 | ambiguous | -0.303 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | N |
S/R | 0.5071 | ambiguous | 0.5539 | ambiguous | -0.242 | Destabilizing | 0.38 | N | 0.661 | neutral | None | None | None | None | N |
S/T | 0.0719 | likely_benign | 0.0817 | benign | -0.26 | Destabilizing | None | N | 0.257 | neutral | N | 0.498766577 | None | None | N |
S/V | 0.1226 | likely_benign | 0.1479 | benign | -0.278 | Destabilizing | 0.002 | N | 0.461 | neutral | None | None | None | None | N |
S/W | 0.2156 | likely_benign | 0.2628 | benign | -1.001 | Destabilizing | 0.935 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Y | 0.1109 | likely_benign | 0.138 | benign | -0.71 | Destabilizing | 0.484 | N | 0.714 | prob.delet. | N | 0.508845769 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.