Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5126 | 15601;15602;15603 | chr2:178734448;178734447;178734446 | chr2:179599175;179599174;179599173 |
N2AB | 4809 | 14650;14651;14652 | chr2:178734448;178734447;178734446 | chr2:179599175;179599174;179599173 |
N2A | 3882 | 11869;11870;11871 | chr2:178734448;178734447;178734446 | chr2:179599175;179599174;179599173 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs867299578 | 0.042 | 0.248 | N | 0.193 | 0.233 | 0.152612264143 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/K | rs867299578 | 0.042 | 0.248 | N | 0.193 | 0.233 | 0.152612264143 | gnomAD-4.0.0 | 1.59148E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2479 | likely_benign | 0.301 | benign | -0.162 | Destabilizing | 0.97 | D | 0.44 | neutral | None | None | None | None | N |
Q/C | 0.6465 | likely_pathogenic | 0.7318 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
Q/D | 0.2539 | likely_benign | 0.2949 | benign | 0.203 | Stabilizing | 0.985 | D | 0.437 | neutral | None | None | None | None | N |
Q/E | 0.075 | likely_benign | 0.08 | benign | 0.176 | Stabilizing | 0.91 | D | 0.348 | neutral | N | 0.416701442 | None | None | N |
Q/F | 0.6568 | likely_pathogenic | 0.7423 | pathogenic | -0.449 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
Q/G | 0.2178 | likely_benign | 0.2581 | benign | -0.321 | Destabilizing | 0.985 | D | 0.493 | neutral | None | None | None | None | N |
Q/H | 0.1762 | likely_benign | 0.2038 | benign | -0.112 | Destabilizing | 0.998 | D | 0.502 | neutral | N | 0.493996747 | None | None | N |
Q/I | 0.4224 | ambiguous | 0.4953 | ambiguous | 0.162 | Stabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
Q/K | 0.0837 | likely_benign | 0.0911 | benign | 0.134 | Stabilizing | 0.248 | N | 0.193 | neutral | N | 0.435904354 | None | None | N |
Q/L | 0.1583 | likely_benign | 0.1872 | benign | 0.162 | Stabilizing | 0.98 | D | 0.493 | neutral | N | 0.510033142 | None | None | N |
Q/M | 0.4116 | ambiguous | 0.4713 | ambiguous | 0.221 | Stabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | N |
Q/N | 0.2272 | likely_benign | 0.2777 | benign | -0.239 | Destabilizing | 0.985 | D | 0.441 | neutral | None | None | None | None | N |
Q/P | 0.2404 | likely_benign | 0.2795 | benign | 0.081 | Stabilizing | 0.998 | D | 0.496 | neutral | N | 0.512590657 | None | None | N |
Q/R | 0.0948 | likely_benign | 0.0971 | benign | 0.282 | Stabilizing | 0.925 | D | 0.423 | neutral | N | 0.479765668 | None | None | N |
Q/S | 0.2174 | likely_benign | 0.2629 | benign | -0.238 | Destabilizing | 0.97 | D | 0.405 | neutral | None | None | None | None | N |
Q/T | 0.2116 | likely_benign | 0.2566 | benign | -0.111 | Destabilizing | 0.985 | D | 0.451 | neutral | None | None | None | None | N |
Q/V | 0.2858 | likely_benign | 0.339 | benign | 0.081 | Stabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | N |
Q/W | 0.4798 | ambiguous | 0.5521 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
Q/Y | 0.4347 | ambiguous | 0.5154 | ambiguous | -0.187 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.