Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5127 | 15604;15605;15606 | chr2:178734445;178734444;178734443 | chr2:179599172;179599171;179599170 |
N2AB | 4810 | 14653;14654;14655 | chr2:178734445;178734444;178734443 | chr2:179599172;179599171;179599170 |
N2A | 3883 | 11872;11873;11874 | chr2:178734445;178734444;178734443 | chr2:179599172;179599171;179599170 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1349879607 | 0.326 | 0.801 | N | 0.242 | 0.21 | 0.176091768786 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1349879607 | 0.326 | 0.801 | N | 0.242 | 0.21 | 0.176091768786 | gnomAD-4.0.0 | 1.3685E-06 | None | None | None | None | N | None | 0 | 4.47367E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2588 | likely_benign | 0.3309 | benign | -0.011 | Destabilizing | 0.688 | D | 0.299 | neutral | None | None | None | None | N |
K/C | 0.675 | likely_pathogenic | 0.7685 | pathogenic | -0.486 | Destabilizing | 0.998 | D | 0.301 | neutral | None | None | None | None | N |
K/D | 0.2458 | likely_benign | 0.3043 | benign | -0.245 | Destabilizing | 0.016 | N | 0.159 | neutral | None | None | None | None | N |
K/E | 0.1302 | likely_benign | 0.1612 | benign | -0.263 | Destabilizing | 0.022 | N | 0.131 | neutral | N | 0.450974339 | None | None | N |
K/F | 0.7032 | likely_pathogenic | 0.79 | pathogenic | -0.387 | Destabilizing | 0.991 | D | 0.293 | neutral | None | None | None | None | N |
K/G | 0.2356 | likely_benign | 0.2812 | benign | -0.124 | Destabilizing | 0.915 | D | 0.325 | neutral | None | None | None | None | N |
K/H | 0.2336 | likely_benign | 0.2764 | benign | -0.235 | Destabilizing | 0.974 | D | 0.332 | neutral | None | None | None | None | N |
K/I | 0.3986 | ambiguous | 0.5102 | ambiguous | 0.201 | Stabilizing | 0.974 | D | 0.32 | neutral | None | None | None | None | N |
K/L | 0.3312 | likely_benign | 0.4191 | ambiguous | 0.201 | Stabilizing | 0.842 | D | 0.325 | neutral | None | None | None | None | N |
K/M | 0.2383 | likely_benign | 0.3067 | benign | -0.101 | Destabilizing | 0.989 | D | 0.329 | neutral | N | 0.500378658 | None | None | N |
K/N | 0.1824 | likely_benign | 0.2225 | benign | -0.029 | Destabilizing | 0.801 | D | 0.242 | neutral | N | 0.393694513 | None | None | N |
K/P | 0.3903 | ambiguous | 0.4617 | ambiguous | 0.153 | Stabilizing | 0.991 | D | 0.368 | neutral | None | None | None | None | N |
K/Q | 0.1113 | likely_benign | 0.1319 | benign | -0.169 | Destabilizing | 0.136 | N | 0.164 | neutral | N | 0.440477909 | None | None | N |
K/R | 0.0873 | likely_benign | 0.0898 | benign | -0.138 | Destabilizing | 0.012 | N | 0.157 | neutral | N | 0.456920552 | None | None | N |
K/S | 0.2426 | likely_benign | 0.3049 | benign | -0.401 | Destabilizing | 0.688 | D | 0.223 | neutral | None | None | None | None | N |
K/T | 0.1525 | likely_benign | 0.2084 | benign | -0.306 | Destabilizing | 0.891 | D | 0.306 | neutral | N | 0.494511883 | None | None | N |
K/V | 0.3558 | ambiguous | 0.4597 | ambiguous | 0.153 | Stabilizing | 0.915 | D | 0.329 | neutral | None | None | None | None | N |
K/W | 0.7126 | likely_pathogenic | 0.7902 | pathogenic | -0.49 | Destabilizing | 0.998 | D | 0.363 | neutral | None | None | None | None | N |
K/Y | 0.4827 | ambiguous | 0.5754 | pathogenic | -0.135 | Destabilizing | 0.991 | D | 0.31 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.