Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5132 | 15619;15620;15621 | chr2:178734430;178734429;178734428 | chr2:179599157;179599156;179599155 |
N2AB | 4815 | 14668;14669;14670 | chr2:178734430;178734429;178734428 | chr2:179599157;179599156;179599155 |
N2A | 3888 | 11887;11888;11889 | chr2:178734430;178734429;178734428 | chr2:179599157;179599156;179599155 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.918 | 0.922 | 0.945249901596 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7862 | likely_pathogenic | 0.8409 | pathogenic | -2.581 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
L/C | 0.8332 | likely_pathogenic | 0.8814 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -3.399 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9936 | likely_pathogenic | 0.9948 | pathogenic | -3.098 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/F | 0.4499 | ambiguous | 0.5917 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/G | 0.9673 | likely_pathogenic | 0.9784 | pathogenic | -3.119 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/H | 0.9824 | likely_pathogenic | 0.9877 | pathogenic | -2.92 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/I | 0.17 | likely_benign | 0.1993 | benign | -0.944 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
L/K | 0.9926 | likely_pathogenic | 0.9931 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.1477 | likely_benign | 0.1878 | benign | -1.051 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.692356895 | None | None | N |
L/N | 0.9941 | likely_pathogenic | 0.9958 | pathogenic | -2.902 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/P | 0.994 | likely_pathogenic | 0.9954 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.918 | deleterious | D | 0.797220495 | None | None | N |
L/Q | 0.9624 | likely_pathogenic | 0.9684 | pathogenic | -2.523 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.797220495 | None | None | N |
L/R | 0.9825 | likely_pathogenic | 0.9831 | pathogenic | -2.272 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.797220495 | None | None | N |
L/S | 0.9682 | likely_pathogenic | 0.9795 | pathogenic | -3.282 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/T | 0.8821 | likely_pathogenic | 0.9142 | pathogenic | -2.829 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/V | 0.1606 | likely_benign | 0.1972 | benign | -1.485 | Destabilizing | 0.999 | D | 0.643 | neutral | D | 0.722701596 | None | None | N |
L/W | 0.9371 | likely_pathogenic | 0.9571 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/Y | 0.9587 | likely_pathogenic | 0.9729 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.