Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5136 | 15631;15632;15633 | chr2:178734418;178734417;178734416 | chr2:179599145;179599144;179599143 |
N2AB | 4819 | 14680;14681;14682 | chr2:178734418;178734417;178734416 | chr2:179599145;179599144;179599143 |
N2A | 3892 | 11899;11900;11901 | chr2:178734418;178734417;178734416 | chr2:179599145;179599144;179599143 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs764310312 | -0.265 | 0.993 | D | 0.522 | 0.493 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/L | rs764310312 | -0.265 | 0.993 | D | 0.522 | 0.493 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/L | rs764310312 | -0.265 | 0.993 | D | 0.522 | 0.493 | None | gnomAD-4.0.0 | 9.29666E-06 | None | None | None | None | N | None | 6.67717E-05 | 1.66728E-05 | None | 0 | 0 | None | 0 | 0 | 6.78143E-06 | 0 | 1.60118E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0645 | likely_benign | 0.0757 | benign | -0.608 | Destabilizing | 0.91 | D | 0.449 | neutral | N | 0.51101014 | None | None | N |
S/C | 0.1142 | likely_benign | 0.127 | benign | -0.345 | Destabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | N |
S/D | 0.6298 | likely_pathogenic | 0.658 | pathogenic | -0.233 | Destabilizing | 0.985 | D | 0.426 | neutral | None | None | None | None | N |
S/E | 0.7491 | likely_pathogenic | 0.7839 | pathogenic | -0.304 | Destabilizing | 0.985 | D | 0.411 | neutral | None | None | None | None | N |
S/F | 0.1972 | likely_benign | 0.2586 | benign | -1.159 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
S/G | 0.0892 | likely_benign | 0.1034 | benign | -0.755 | Destabilizing | 0.985 | D | 0.451 | neutral | None | None | None | None | N |
S/H | 0.4519 | ambiguous | 0.4906 | ambiguous | -1.338 | Destabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
S/I | 0.2226 | likely_benign | 0.289 | benign | -0.341 | Destabilizing | 0.991 | D | 0.572 | neutral | None | None | None | None | N |
S/K | 0.8673 | likely_pathogenic | 0.8939 | pathogenic | -0.589 | Destabilizing | 0.97 | D | 0.411 | neutral | None | None | None | None | N |
S/L | 0.0925 | likely_benign | 0.1103 | benign | -0.341 | Destabilizing | 0.993 | D | 0.522 | neutral | D | 0.523115023 | None | None | N |
S/M | 0.1931 | likely_benign | 0.2458 | benign | 0.155 | Stabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
S/N | 0.1816 | likely_benign | 0.2009 | benign | -0.409 | Destabilizing | 0.985 | D | 0.451 | neutral | None | None | None | None | N |
S/P | 0.4057 | ambiguous | 0.524 | ambiguous | -0.401 | Destabilizing | 0.998 | D | 0.46 | neutral | N | 0.51781075 | None | None | N |
S/Q | 0.5888 | likely_pathogenic | 0.6421 | pathogenic | -0.709 | Destabilizing | 0.999 | D | 0.448 | neutral | None | None | None | None | N |
S/R | 0.8128 | likely_pathogenic | 0.8221 | pathogenic | -0.358 | Destabilizing | 0.996 | D | 0.474 | neutral | None | None | None | None | N |
S/T | 0.0906 | likely_benign | 0.107 | benign | -0.49 | Destabilizing | 0.122 | N | 0.188 | neutral | N | 0.50361136 | None | None | N |
S/V | 0.1784 | likely_benign | 0.2342 | benign | -0.401 | Destabilizing | 0.97 | D | 0.529 | neutral | None | None | None | None | N |
S/W | 0.3989 | ambiguous | 0.4651 | ambiguous | -1.118 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.587782055 | None | None | N |
S/Y | 0.1991 | likely_benign | 0.232 | benign | -0.852 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.