Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5139 | 15640;15641;15642 | chr2:178734409;178734408;178734407 | chr2:179599136;179599135;179599134 |
N2AB | 4822 | 14689;14690;14691 | chr2:178734409;178734408;178734407 | chr2:179599136;179599135;179599134 |
N2A | 3895 | 11908;11909;11910 | chr2:178734409;178734408;178734407 | chr2:179599136;179599135;179599134 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs876658040 | None | 0.999 | N | 0.423 | 0.538 | 0.394685799254 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
S/N | rs2081075120 | None | 0.999 | N | 0.496 | 0.343 | 0.352048277211 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs2081075120 | None | 0.999 | N | 0.496 | 0.343 | 0.352048277211 | gnomAD-4.0.0 | 1.85922E-06 | None | None | None | None | I | None | 0 | 1.66717E-05 | None | 0 | 0 | None | 0 | 0 | 1.69532E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0794 | likely_benign | 0.0797 | benign | -0.192 | Destabilizing | 0.998 | D | 0.411 | neutral | None | None | None | None | I |
S/C | 0.2366 | likely_benign | 0.2085 | benign | -0.354 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.654571897 | None | None | I |
S/D | 0.6818 | likely_pathogenic | 0.5183 | ambiguous | 0.147 | Stabilizing | 0.999 | D | 0.53 | neutral | None | None | None | None | I |
S/E | 0.7859 | likely_pathogenic | 0.6427 | pathogenic | 0.042 | Stabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | I |
S/F | 0.29 | likely_benign | 0.2913 | benign | -0.931 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
S/G | 0.1055 | likely_benign | 0.0908 | benign | -0.245 | Destabilizing | 0.999 | D | 0.423 | neutral | N | 0.516619085 | None | None | I |
S/H | 0.5449 | ambiguous | 0.4015 | ambiguous | -0.597 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
S/I | 0.2171 | likely_benign | 0.1817 | benign | -0.185 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.51957417 | None | None | I |
S/K | 0.8694 | likely_pathogenic | 0.6634 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | I |
S/L | 0.1164 | likely_benign | 0.124 | benign | -0.185 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
S/M | 0.2432 | likely_benign | 0.2333 | benign | -0.147 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
S/N | 0.2207 | likely_benign | 0.1522 | benign | -0.137 | Destabilizing | 0.999 | D | 0.496 | neutral | N | 0.519291441 | None | None | I |
S/P | 0.2066 | likely_benign | 0.184 | benign | -0.162 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
S/Q | 0.6907 | likely_pathogenic | 0.5267 | ambiguous | -0.347 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
S/R | 0.8271 | likely_pathogenic | 0.5518 | ambiguous | -0.12 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.511623139 | None | None | I |
S/T | 0.0881 | likely_benign | 0.0884 | benign | -0.242 | Destabilizing | 0.999 | D | 0.395 | neutral | N | 0.493666226 | None | None | I |
S/V | 0.2021 | likely_benign | 0.1841 | benign | -0.162 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
S/W | 0.5047 | ambiguous | 0.4645 | ambiguous | -1.012 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
S/Y | 0.2965 | likely_benign | 0.2741 | benign | -0.689 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.