Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5144 | 15655;15656;15657 | chr2:178734394;178734393;178734392 | chr2:179599121;179599120;179599119 |
N2AB | 4827 | 14704;14705;14706 | chr2:178734394;178734393;178734392 | chr2:179599121;179599120;179599119 |
N2A | 3900 | 11923;11924;11925 | chr2:178734394;178734393;178734392 | chr2:179599121;179599120;179599119 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs766612317 | -0.207 | 0.117 | D | 0.503 | 0.18 | 0.295623431141 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/K | rs766612317 | -0.207 | 0.117 | D | 0.503 | 0.18 | 0.295623431141 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs766612317 | -0.207 | 0.117 | D | 0.503 | 0.18 | 0.295623431141 | gnomAD-4.0.0 | 5.88951E-05 | None | None | None | None | N | None | 1.3349E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.97028E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0944 | likely_benign | 0.1055 | benign | -0.925 | Destabilizing | 0.117 | N | 0.527 | neutral | D | 0.609632849 | None | None | N |
E/C | 0.5121 | ambiguous | 0.5862 | pathogenic | -0.519 | Destabilizing | 0.935 | D | 0.59 | neutral | None | None | None | None | N |
E/D | 0.0653 | likely_benign | 0.0681 | benign | -0.969 | Destabilizing | None | N | 0.165 | neutral | N | 0.513354809 | None | None | N |
E/F | 0.3944 | ambiguous | 0.4642 | ambiguous | -0.374 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
E/G | 0.116 | likely_benign | 0.1349 | benign | -1.278 | Destabilizing | 0.117 | N | 0.541 | neutral | D | 0.733874274 | None | None | N |
E/H | 0.2199 | likely_benign | 0.2526 | benign | -0.678 | Destabilizing | 0.555 | D | 0.525 | neutral | None | None | None | None | N |
E/I | 0.1402 | likely_benign | 0.1685 | benign | 0.038 | Stabilizing | 0.001 | N | 0.407 | neutral | None | None | None | None | N |
E/K | 0.1009 | likely_benign | 0.1063 | benign | -0.775 | Destabilizing | 0.117 | N | 0.503 | neutral | D | 0.523636015 | None | None | N |
E/L | 0.167 | likely_benign | 0.2026 | benign | 0.038 | Stabilizing | 0.081 | N | 0.538 | neutral | None | None | None | None | N |
E/M | 0.231 | likely_benign | 0.2665 | benign | 0.475 | Stabilizing | 0.698 | D | 0.583 | neutral | None | None | None | None | N |
E/N | 0.089 | likely_benign | 0.1019 | benign | -1.143 | Destabilizing | 0.081 | N | 0.501 | neutral | None | None | None | None | N |
E/P | 0.4063 | ambiguous | 0.4621 | ambiguous | -0.263 | Destabilizing | 0.555 | D | 0.569 | neutral | None | None | None | None | N |
E/Q | 0.0879 | likely_benign | 0.0965 | benign | -1.004 | Destabilizing | 0.117 | N | 0.51 | neutral | D | 0.577110476 | None | None | N |
E/R | 0.1672 | likely_benign | 0.1713 | benign | -0.478 | Destabilizing | 0.38 | N | 0.537 | neutral | None | None | None | None | N |
E/S | 0.0986 | likely_benign | 0.1084 | benign | -1.463 | Destabilizing | 0.081 | N | 0.505 | neutral | None | None | None | None | N |
E/T | 0.1148 | likely_benign | 0.1351 | benign | -1.176 | Destabilizing | 0.149 | N | 0.535 | neutral | None | None | None | None | N |
E/V | 0.101 | likely_benign | 0.1121 | benign | -0.263 | Destabilizing | 0.062 | N | 0.547 | neutral | N | 0.503359067 | None | None | N |
E/W | 0.6598 | likely_pathogenic | 0.712 | pathogenic | -0.127 | Destabilizing | 0.935 | D | 0.604 | neutral | None | None | None | None | N |
E/Y | 0.2667 | likely_benign | 0.3171 | benign | -0.149 | Destabilizing | 0.791 | D | 0.602 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.