Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5147 | 15664;15665;15666 | chr2:178734385;178734384;178734383 | chr2:179599112;179599111;179599110 |
N2AB | 4830 | 14713;14714;14715 | chr2:178734385;178734384;178734383 | chr2:179599112;179599111;179599110 |
N2A | 3903 | 11932;11933;11934 | chr2:178734385;178734384;178734383 | chr2:179599112;179599111;179599110 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1159353292 | -1.408 | 0.999 | D | 0.855 | 0.751 | 0.878624890865 | gnomAD-2.1.1 | 4.03E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
C/Y | rs1159353292 | -1.408 | 0.999 | D | 0.855 | 0.751 | 0.878624890865 | gnomAD-4.0.0 | 1.5943E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4367E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8356 | likely_pathogenic | 0.8939 | pathogenic | -1.38 | Destabilizing | 0.964 | D | 0.675 | prob.neutral | None | None | disulfide | None | N |
C/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -1.531 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | disulfide | None | N |
C/E | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.272 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | disulfide | None | N |
C/F | 0.7948 | likely_pathogenic | 0.8413 | pathogenic | -0.763 | Destabilizing | 0.994 | D | 0.853 | deleterious | D | 0.80542453 | disulfide | None | N |
C/G | 0.7763 | likely_pathogenic | 0.8693 | pathogenic | -1.755 | Destabilizing | 0.997 | D | 0.855 | deleterious | D | 0.835407336 | disulfide | None | N |
C/H | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | disulfide | None | N |
C/I | 0.7985 | likely_pathogenic | 0.8444 | pathogenic | -0.357 | Destabilizing | 0.971 | D | 0.786 | deleterious | None | None | disulfide | None | N |
C/K | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.916 | Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | disulfide | None | N |
C/L | 0.7364 | likely_pathogenic | 0.7712 | pathogenic | -0.357 | Destabilizing | 0.931 | D | 0.747 | deleterious | None | None | disulfide | None | N |
C/M | 0.898 | likely_pathogenic | 0.92 | pathogenic | 0.377 | Stabilizing | 0.931 | D | 0.611 | neutral | None | None | disulfide | None | N |
C/N | 0.9953 | likely_pathogenic | 0.9973 | pathogenic | -1.727 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | disulfide | None | N |
C/P | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -0.676 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -1.203 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | disulfide | None | N |
C/R | 0.9964 | likely_pathogenic | 0.9974 | pathogenic | -1.364 | Destabilizing | 0.997 | D | 0.867 | deleterious | D | 0.835407336 | disulfide | None | N |
C/S | 0.9621 | likely_pathogenic | 0.9812 | pathogenic | -1.974 | Destabilizing | 0.99 | D | 0.77 | deleterious | D | 0.783409376 | disulfide | None | N |
C/T | 0.9581 | likely_pathogenic | 0.9743 | pathogenic | -1.522 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | disulfide | None | N |
C/V | 0.6717 | likely_pathogenic | 0.7376 | pathogenic | -0.676 | Destabilizing | 0.971 | D | 0.763 | deleterious | None | None | disulfide | None | N |
C/W | 0.9878 | likely_pathogenic | 0.9924 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.835407336 | disulfide | None | N |
C/Y | 0.9614 | likely_pathogenic | 0.9761 | pathogenic | -0.948 | Destabilizing | 0.999 | D | 0.855 | deleterious | D | 0.836314793 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.