Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5150 | 15673;15674;15675 | chr2:178734376;178734375;178734374 | chr2:179599103;179599102;179599101 |
N2AB | 4833 | 14722;14723;14724 | chr2:178734376;178734375;178734374 | chr2:179599103;179599102;179599101 |
N2A | 3906 | 11941;11942;11943 | chr2:178734376;178734375;178734374 | chr2:179599103;179599102;179599101 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.956 | N | 0.617 | 0.284 | 0.402899589544 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
A/V | None | None | 0.989 | N | 0.672 | 0.387 | 0.65763613582 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4632 | ambiguous | 0.4782 | ambiguous | -1.105 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
A/D | 0.433 | ambiguous | 0.4529 | ambiguous | -1.594 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | N | 0.499788197 | None | None | N |
A/E | 0.3311 | likely_benign | 0.3273 | benign | -1.604 | Destabilizing | 0.983 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/F | 0.3435 | ambiguous | 0.3516 | ambiguous | -1.09 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
A/G | 0.1475 | likely_benign | 0.1588 | benign | -1.347 | Destabilizing | 0.948 | D | 0.612 | neutral | N | 0.502749863 | None | None | N |
A/H | 0.5128 | ambiguous | 0.5126 | ambiguous | -1.487 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
A/I | 0.2743 | likely_benign | 0.2964 | benign | -0.438 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
A/K | 0.5391 | ambiguous | 0.5393 | ambiguous | -1.359 | Destabilizing | 0.983 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/L | 0.2035 | likely_benign | 0.2102 | benign | -0.438 | Destabilizing | 0.992 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/M | 0.2236 | likely_benign | 0.2303 | benign | -0.408 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/N | 0.2824 | likely_benign | 0.3053 | benign | -1.149 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/P | 0.9312 | likely_pathogenic | 0.9477 | pathogenic | -0.606 | Destabilizing | 0.997 | D | 0.755 | deleterious | N | 0.509161759 | None | None | N |
A/Q | 0.3533 | ambiguous | 0.3485 | ambiguous | -1.305 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
A/R | 0.476 | ambiguous | 0.4555 | ambiguous | -0.992 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
A/S | 0.0861 | likely_benign | 0.0889 | benign | -1.499 | Destabilizing | 0.418 | N | 0.335 | neutral | N | 0.383684205 | None | None | N |
A/T | 0.0821 | likely_benign | 0.0862 | benign | -1.416 | Destabilizing | 0.956 | D | 0.617 | neutral | N | 0.380304666 | None | None | N |
A/V | 0.1451 | likely_benign | 0.1528 | benign | -0.606 | Destabilizing | 0.989 | D | 0.672 | neutral | N | 0.452411247 | None | None | N |
A/W | 0.7485 | likely_pathogenic | 0.742 | pathogenic | -1.458 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
A/Y | 0.4942 | ambiguous | 0.5186 | ambiguous | -1.058 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.