Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5152 | 15679;15680;15681 | chr2:178734370;178734369;178734368 | chr2:179599097;179599096;179599095 |
N2AB | 4835 | 14728;14729;14730 | chr2:178734370;178734369;178734368 | chr2:179599097;179599096;179599095 |
N2A | 3908 | 11947;11948;11949 | chr2:178734370;178734369;178734368 | chr2:179599097;179599096;179599095 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.978 | N | 0.541 | 0.38 | 0.455996456696 | gnomAD-4.0.0 | 6.86655E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16902E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2932 | likely_benign | 0.2842 | benign | -0.038 | Destabilizing | 0.989 | D | 0.54 | neutral | N | 0.516109536 | None | None | I |
E/C | 0.96 | likely_pathogenic | 0.9622 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/D | 0.1305 | likely_benign | 0.1273 | benign | -0.378 | Destabilizing | 0.054 | N | 0.402 | neutral | N | 0.485681447 | None | None | I |
E/F | 0.9413 | likely_pathogenic | 0.9368 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
E/G | 0.3608 | ambiguous | 0.3582 | ambiguous | -0.147 | Destabilizing | 0.978 | D | 0.451 | neutral | N | 0.505596981 | None | None | I |
E/H | 0.755 | likely_pathogenic | 0.7419 | pathogenic | 0.458 | Stabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
E/I | 0.6284 | likely_pathogenic | 0.6437 | pathogenic | 0.189 | Stabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
E/K | 0.3815 | ambiguous | 0.3437 | ambiguous | 0.428 | Stabilizing | 0.978 | D | 0.541 | neutral | N | 0.511986766 | None | None | I |
E/L | 0.7301 | likely_pathogenic | 0.7282 | pathogenic | 0.189 | Stabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
E/M | 0.7492 | likely_pathogenic | 0.7522 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
E/N | 0.4513 | ambiguous | 0.4453 | ambiguous | 0.186 | Stabilizing | 0.995 | D | 0.554 | neutral | None | None | None | None | I |
E/P | 0.7473 | likely_pathogenic | 0.7228 | pathogenic | 0.131 | Stabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
E/Q | 0.3255 | likely_benign | 0.3099 | benign | 0.19 | Stabilizing | 0.997 | D | 0.531 | neutral | N | 0.506414122 | None | None | I |
E/R | 0.5818 | likely_pathogenic | 0.5358 | ambiguous | 0.623 | Stabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
E/S | 0.3662 | ambiguous | 0.3377 | benign | 0.066 | Stabilizing | 0.983 | D | 0.534 | neutral | None | None | None | None | I |
E/T | 0.4342 | ambiguous | 0.4323 | ambiguous | 0.162 | Stabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | I |
E/V | 0.4161 | ambiguous | 0.4243 | ambiguous | 0.131 | Stabilizing | 0.999 | D | 0.575 | neutral | N | 0.513746398 | None | None | I |
E/W | 0.9802 | likely_pathogenic | 0.9779 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.8741 | likely_pathogenic | 0.8667 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.