Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5153 | 15682;15683;15684 | chr2:178734367;178734366;178734365 | chr2:179599094;179599093;179599092 |
N2AB | 4836 | 14731;14732;14733 | chr2:178734367;178734366;178734365 | chr2:179599094;179599093;179599092 |
N2A | 3909 | 11950;11951;11952 | chr2:178734367;178734366;178734365 | chr2:179599094;179599093;179599092 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 1.0 | D | 0.741 | 0.686 | 0.895487556599 | gnomAD-4.0.0 | 1.37438E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02887E-07 | 1.16981E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.172 | likely_benign | 0.1508 | benign | -0.365 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.509611535 | None | None | I |
V/C | 0.9068 | likely_pathogenic | 0.8855 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/D | 0.8542 | likely_pathogenic | 0.8234 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.740793439 | None | None | I |
V/E | 0.7528 | likely_pathogenic | 0.691 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/F | 0.313 | likely_benign | 0.2678 | benign | -0.774 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.510902964 | None | None | I |
V/G | 0.3723 | ambiguous | 0.3423 | ambiguous | -0.414 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.543958538 | None | None | I |
V/H | 0.8977 | likely_pathogenic | 0.868 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/I | 0.1297 | likely_benign | 0.1395 | benign | -0.38 | Destabilizing | 0.997 | D | 0.527 | neutral | D | 0.554005926 | None | None | I |
V/K | 0.8579 | likely_pathogenic | 0.8155 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
V/L | 0.5273 | ambiguous | 0.5391 | ambiguous | -0.38 | Destabilizing | 0.997 | D | 0.609 | neutral | N | 0.508872947 | None | None | I |
V/M | 0.3578 | ambiguous | 0.3384 | benign | -0.599 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
V/N | 0.6909 | likely_pathogenic | 0.6528 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
V/P | 0.9512 | likely_pathogenic | 0.9464 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
V/Q | 0.7989 | likely_pathogenic | 0.7395 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
V/R | 0.8038 | likely_pathogenic | 0.74 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/S | 0.4315 | ambiguous | 0.3689 | ambiguous | -0.505 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/T | 0.3242 | likely_benign | 0.2993 | benign | -0.542 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/W | 0.9457 | likely_pathogenic | 0.9321 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/Y | 0.7953 | likely_pathogenic | 0.7424 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.