Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5155 | 15688;15689;15690 | chr2:178734361;178734360;178734359 | chr2:179599088;179599087;179599086 |
N2AB | 4838 | 14737;14738;14739 | chr2:178734361;178734360;178734359 | chr2:179599088;179599087;179599086 |
N2A | 3911 | 11956;11957;11958 | chr2:178734361;178734360;178734359 | chr2:179599088;179599087;179599086 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1215311775 | 0.414 | 0.982 | N | 0.686 | 0.335 | 0.218845423259 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
K/N | rs1215311775 | 0.414 | 0.982 | N | 0.686 | 0.335 | 0.218845423259 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1215311775 | 0.414 | 0.982 | N | 0.686 | 0.335 | 0.218845423259 | gnomAD-4.0.0 | 4.35866E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.95812E-06 | 0 | 0 |
K/R | rs727504207 | None | 0.046 | N | 0.235 | 0.219 | 0.239901079897 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4243 | ambiguous | 0.4495 | ambiguous | -0.047 | Destabilizing | 0.953 | D | 0.647 | neutral | None | None | None | None | I |
K/C | 0.6843 | likely_pathogenic | 0.727 | pathogenic | -0.317 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/D | 0.6412 | likely_pathogenic | 0.6612 | pathogenic | 0.019 | Stabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | I |
K/E | 0.2414 | likely_benign | 0.2542 | benign | 0.044 | Stabilizing | 0.939 | D | 0.611 | neutral | N | 0.457557886 | None | None | I |
K/F | 0.7491 | likely_pathogenic | 0.7812 | pathogenic | -0.127 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/G | 0.5215 | ambiguous | 0.5422 | ambiguous | -0.278 | Destabilizing | 0.976 | D | 0.605 | neutral | None | None | None | None | I |
K/H | 0.2971 | likely_benign | 0.3199 | benign | -0.493 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | I |
K/I | 0.3964 | ambiguous | 0.4253 | ambiguous | 0.491 | Stabilizing | 0.993 | D | 0.694 | prob.neutral | None | None | None | None | I |
K/L | 0.4265 | ambiguous | 0.4659 | ambiguous | 0.491 | Stabilizing | 0.953 | D | 0.605 | neutral | None | None | None | None | I |
K/M | 0.2817 | likely_benign | 0.3038 | benign | 0.19 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.518957043 | None | None | I |
K/N | 0.4116 | ambiguous | 0.441 | ambiguous | 0.055 | Stabilizing | 0.982 | D | 0.686 | prob.neutral | N | 0.516951073 | None | None | I |
K/P | 0.904 | likely_pathogenic | 0.9016 | pathogenic | 0.34 | Stabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | I |
K/Q | 0.1347 | likely_benign | 0.1473 | benign | -0.093 | Destabilizing | 0.982 | D | 0.69 | prob.neutral | N | 0.488387116 | None | None | I |
K/R | 0.082 | likely_benign | 0.0835 | benign | -0.143 | Destabilizing | 0.046 | N | 0.235 | neutral | N | 0.50320625 | None | None | I |
K/S | 0.3615 | ambiguous | 0.38 | ambiguous | -0.441 | Destabilizing | 0.953 | D | 0.665 | neutral | None | None | None | None | I |
K/T | 0.178 | likely_benign | 0.1882 | benign | -0.259 | Destabilizing | 0.991 | D | 0.646 | neutral | N | 0.480748321 | None | None | I |
K/V | 0.3542 | ambiguous | 0.3802 | ambiguous | 0.34 | Stabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | I |
K/W | 0.7762 | likely_pathogenic | 0.7967 | pathogenic | -0.121 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
K/Y | 0.599 | likely_pathogenic | 0.6327 | pathogenic | 0.209 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.