Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5156 | 15691;15692;15693 | chr2:178734358;178734357;178734356 | chr2:179599085;179599084;179599083 |
N2AB | 4839 | 14740;14741;14742 | chr2:178734358;178734357;178734356 | chr2:179599085;179599084;179599083 |
N2A | 3912 | 11959;11960;11961 | chr2:178734358;178734357;178734356 | chr2:179599085;179599084;179599083 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.996 | D | 0.663 | 0.402 | 0.770558164856 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2378 | likely_benign | 0.2597 | benign | -1.312 | Destabilizing | 0.863 | D | 0.383 | neutral | None | None | None | None | I |
C/D | 0.3638 | ambiguous | 0.4859 | ambiguous | 0.22 | Stabilizing | 0.884 | D | 0.66 | neutral | None | None | None | None | I |
C/E | 0.602 | likely_pathogenic | 0.6717 | pathogenic | 0.286 | Stabilizing | 0.939 | D | 0.695 | prob.neutral | None | None | None | None | I |
C/F | 0.2548 | likely_benign | 0.3003 | benign | -0.762 | Destabilizing | 0.996 | D | 0.662 | neutral | D | 0.573970628 | None | None | I |
C/G | 0.1516 | likely_benign | 0.1776 | benign | -1.577 | Destabilizing | 0.015 | N | 0.402 | neutral | N | 0.508140706 | None | None | I |
C/H | 0.4384 | ambiguous | 0.4947 | ambiguous | -1.434 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | I |
C/I | 0.3752 | ambiguous | 0.4032 | ambiguous | -0.655 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | I |
C/K | 0.6938 | likely_pathogenic | 0.7208 | pathogenic | -0.55 | Destabilizing | 0.939 | D | 0.683 | prob.neutral | None | None | None | None | I |
C/L | 0.4766 | ambiguous | 0.505 | ambiguous | -0.655 | Destabilizing | 0.969 | D | 0.554 | neutral | None | None | None | None | I |
C/M | 0.5527 | ambiguous | 0.594 | pathogenic | 0.061 | Stabilizing | 0.997 | D | 0.562 | neutral | None | None | None | None | I |
C/N | 0.3689 | ambiguous | 0.4437 | ambiguous | -0.466 | Destabilizing | 0.079 | N | 0.403 | neutral | None | None | None | None | I |
C/P | 0.9755 | likely_pathogenic | 0.9827 | pathogenic | -0.847 | Destabilizing | 0.997 | D | 0.693 | prob.neutral | None | None | None | None | I |
C/Q | 0.4746 | ambiguous | 0.5018 | ambiguous | -0.412 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | I |
C/R | 0.3939 | ambiguous | 0.3992 | ambiguous | -0.333 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | N | 0.50516102 | None | None | I |
C/S | 0.1684 | likely_benign | 0.198 | benign | -1.022 | Destabilizing | 0.826 | D | 0.501 | neutral | N | 0.470705775 | None | None | I |
C/T | 0.2573 | likely_benign | 0.2774 | benign | -0.783 | Destabilizing | 0.939 | D | 0.554 | neutral | None | None | None | None | I |
C/V | 0.2979 | likely_benign | 0.3042 | benign | -0.847 | Destabilizing | 0.99 | D | 0.563 | neutral | None | None | None | None | I |
C/W | 0.5465 | ambiguous | 0.6218 | pathogenic | -0.728 | Destabilizing | 0.999 | D | 0.641 | neutral | D | 0.575136469 | None | None | I |
C/Y | 0.3174 | likely_benign | 0.3676 | ambiguous | -0.698 | Destabilizing | 0.996 | D | 0.663 | neutral | D | 0.573818206 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.