Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5160 | 15703;15704;15705 | chr2:178734346;178734345;178734344 | chr2:179599073;179599072;179599071 |
N2AB | 4843 | 14752;14753;14754 | chr2:178734346;178734345;178734344 | chr2:179599073;179599072;179599071 |
N2A | 3916 | 11971;11972;11973 | chr2:178734346;178734345;178734344 | chr2:179599073;179599072;179599071 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs769431165 | -1.501 | 1.0 | D | 0.661 | 0.446 | 0.510172456258 | gnomAD-2.1.1 | 7.34E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.59E-05 | 0 |
A/T | rs769431165 | -1.501 | 1.0 | D | 0.661 | 0.446 | 0.510172456258 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs769431165 | -1.501 | 1.0 | D | 0.661 | 0.446 | 0.510172456258 | gnomAD-4.0.0 | 6.25758E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5422E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5567 | ambiguous | 0.66 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/D | 0.6084 | likely_pathogenic | 0.7219 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/E | 0.6282 | likely_pathogenic | 0.7387 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.722409013 | None | None | N |
A/F | 0.6807 | likely_pathogenic | 0.7781 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/G | 0.1244 | likely_benign | 0.1545 | benign | -1.285 | Destabilizing | 1.0 | D | 0.551 | neutral | D | 0.531240631 | None | None | N |
A/H | 0.813 | likely_pathogenic | 0.8834 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/I | 0.4955 | ambiguous | 0.6102 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/K | 0.8242 | likely_pathogenic | 0.892 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/L | 0.4426 | ambiguous | 0.5479 | ambiguous | -0.415 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/M | 0.4477 | ambiguous | 0.5679 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/N | 0.5401 | ambiguous | 0.6659 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
A/P | 0.9294 | likely_pathogenic | 0.9557 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.613886777 | None | None | N |
A/Q | 0.6871 | likely_pathogenic | 0.7845 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
A/R | 0.7867 | likely_pathogenic | 0.8465 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.1114 | likely_benign | 0.1281 | benign | -1.359 | Destabilizing | 1.0 | D | 0.574 | neutral | D | 0.526269853 | None | None | N |
A/T | 0.1174 | likely_benign | 0.148 | benign | -1.304 | Destabilizing | 1.0 | D | 0.661 | neutral | D | 0.630751937 | None | None | N |
A/V | 0.2184 | likely_benign | 0.2763 | benign | -0.576 | Destabilizing | 1.0 | D | 0.602 | neutral | D | 0.639811839 | None | None | N |
A/W | 0.9392 | likely_pathogenic | 0.9683 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
A/Y | 0.7902 | likely_pathogenic | 0.8759 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.