Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5162 | 15709;15710;15711 | chr2:178734340;178734339;178734338 | chr2:179599067;179599066;179599065 |
N2AB | 4845 | 14758;14759;14760 | chr2:178734340;178734339;178734338 | chr2:179599067;179599066;179599065 |
N2A | 3918 | 11977;11978;11979 | chr2:178734340;178734339;178734338 | chr2:179599067;179599066;179599065 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | None | N | 0.251 | 0.076 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/R | rs761387658 | -0.793 | 0.025 | N | 0.475 | 0.157 | 0.170165803431 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 3.02E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs761387658 | -0.793 | 0.025 | N | 0.475 | 0.157 | 0.170165803431 | gnomAD-4.0.0 | 3.27872E-06 | None | None | None | None | N | None | 0 | 2.37327E-05 | None | 0 | 0 | None | 0 | 0 | 2.94897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2546 | likely_benign | 0.3557 | ambiguous | -1.839 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
H/C | 0.1136 | likely_benign | 0.1459 | benign | -1.017 | Destabilizing | 0.781 | D | 0.516 | neutral | None | None | None | None | N |
H/D | 0.5168 | ambiguous | 0.6696 | pathogenic | -1.759 | Destabilizing | 0.049 | N | 0.47 | neutral | N | 0.45920018 | None | None | N |
H/E | 0.4608 | ambiguous | 0.5863 | pathogenic | -1.546 | Destabilizing | 0.033 | N | 0.383 | neutral | None | None | None | None | N |
H/F | 0.1385 | likely_benign | 0.2251 | benign | 0.071 | Stabilizing | None | N | 0.223 | neutral | None | None | None | None | N |
H/G | 0.3977 | ambiguous | 0.5049 | ambiguous | -2.285 | Highly Destabilizing | 0.015 | N | 0.383 | neutral | None | None | None | None | N |
H/I | 0.1685 | likely_benign | 0.2103 | benign | -0.511 | Destabilizing | 0.033 | N | 0.495 | neutral | None | None | None | None | N |
H/K | 0.4771 | ambiguous | 0.5452 | ambiguous | -0.973 | Destabilizing | 0.033 | N | 0.425 | neutral | None | None | None | None | N |
H/L | 0.0872 | likely_benign | 0.0927 | benign | -0.511 | Destabilizing | 0.011 | N | 0.418 | neutral | N | 0.455437902 | None | None | N |
H/M | 0.3375 | likely_benign | 0.4062 | ambiguous | -0.746 | Destabilizing | 0.54 | D | 0.501 | neutral | None | None | None | None | N |
H/N | 0.1447 | likely_benign | 0.1941 | benign | -1.848 | Destabilizing | 0.049 | N | 0.478 | neutral | N | 0.45920018 | None | None | N |
H/P | 0.2808 | likely_benign | 0.3713 | ambiguous | -0.945 | Destabilizing | 0.202 | N | 0.476 | neutral | N | 0.459594217 | None | None | N |
H/Q | 0.2146 | likely_benign | 0.3 | benign | -1.476 | Destabilizing | None | N | 0.251 | neutral | N | 0.458103889 | None | None | N |
H/R | 0.2071 | likely_benign | 0.2559 | benign | -1.137 | Destabilizing | 0.025 | N | 0.475 | neutral | N | 0.458777434 | None | None | N |
H/S | 0.2423 | likely_benign | 0.3379 | benign | -2.015 | Highly Destabilizing | 0.015 | N | 0.375 | neutral | None | None | None | None | N |
H/T | 0.2513 | likely_benign | 0.3713 | ambiguous | -1.665 | Destabilizing | 0.064 | N | 0.41 | neutral | None | None | None | None | N |
H/V | 0.1368 | likely_benign | 0.1597 | benign | -0.945 | Destabilizing | 0.064 | N | 0.419 | neutral | None | None | None | None | N |
H/W | 0.3374 | likely_benign | 0.4393 | ambiguous | 0.798 | Stabilizing | 0.54 | D | 0.479 | neutral | None | None | None | None | N |
H/Y | 0.0537 | likely_benign | 0.0826 | benign | 0.539 | Stabilizing | None | N | 0.15 | neutral | N | 0.414605133 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.