Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5169 | 15730;15731;15732 | chr2:178733884;178733883;178733882 | chr2:179598611;179598610;179598609 |
N2AB | 4852 | 14779;14780;14781 | chr2:178733884;178733883;178733882 | chr2:179598611;179598610;179598609 |
N2A | 3925 | 11998;11999;12000 | chr2:178733884;178733883;178733882 | chr2:179598611;179598610;179598609 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs761475085 | None | 0.379 | N | 0.288 | 0.154 | 0.346085882481 | gnomAD-4.0.0 | 1.6477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89459E-05 | 0 | 0 | 0 | 0 |
T/S | rs761475085 | -0.496 | 0.007 | N | 0.11 | 0.149 | 0.168933306366 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.53E-05 | None | 0 | 0 | 0 |
T/S | rs761475085 | -0.496 | 0.007 | N | 0.11 | 0.149 | 0.168933306366 | gnomAD-4.0.0 | 1.6477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.48854E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0644 | likely_benign | 0.0686 | benign | -0.476 | Destabilizing | 0.099 | N | 0.17 | neutral | N | 0.495549489 | None | None | N |
T/C | 0.3216 | likely_benign | 0.3734 | ambiguous | -0.417 | Destabilizing | 0.992 | D | 0.325 | neutral | None | None | None | None | N |
T/D | 0.3896 | ambiguous | 0.4398 | ambiguous | 0.428 | Stabilizing | 0.617 | D | 0.32 | neutral | None | None | None | None | N |
T/E | 0.331 | likely_benign | 0.3665 | ambiguous | 0.428 | Stabilizing | 0.617 | D | 0.283 | neutral | None | None | None | None | N |
T/F | 0.1566 | likely_benign | 0.1805 | benign | -0.782 | Destabilizing | 0.85 | D | 0.385 | neutral | None | None | None | None | N |
T/G | 0.1775 | likely_benign | 0.2138 | benign | -0.681 | Destabilizing | 0.447 | N | 0.292 | neutral | None | None | None | None | N |
T/H | 0.2082 | likely_benign | 0.2372 | benign | -0.761 | Destabilizing | 0.977 | D | 0.347 | neutral | None | None | None | None | N |
T/I | 0.0933 | likely_benign | 0.0905 | benign | -0.037 | Destabilizing | 0.004 | N | 0.191 | neutral | N | 0.512622545 | None | None | N |
T/K | 0.2234 | likely_benign | 0.2322 | benign | -0.225 | Destabilizing | 0.447 | N | 0.327 | neutral | None | None | None | None | N |
T/L | 0.0743 | likely_benign | 0.077 | benign | -0.037 | Destabilizing | 0.103 | N | 0.285 | neutral | None | None | None | None | N |
T/M | 0.0832 | likely_benign | 0.085 | benign | -0.179 | Destabilizing | 0.85 | D | 0.331 | neutral | None | None | None | None | N |
T/N | 0.1035 | likely_benign | 0.1163 | benign | -0.258 | Destabilizing | 0.379 | N | 0.288 | neutral | N | 0.509608057 | None | None | N |
T/P | 0.4325 | ambiguous | 0.456 | ambiguous | -0.152 | Destabilizing | 0.896 | D | 0.369 | neutral | D | 0.553035678 | None | None | N |
T/Q | 0.2079 | likely_benign | 0.2297 | benign | -0.309 | Destabilizing | 0.85 | D | 0.371 | neutral | None | None | None | None | N |
T/R | 0.1798 | likely_benign | 0.1838 | benign | -0.043 | Destabilizing | 0.85 | D | 0.373 | neutral | None | None | None | None | N |
T/S | 0.0815 | likely_benign | 0.0907 | benign | -0.543 | Destabilizing | 0.007 | N | 0.11 | neutral | N | 0.422626058 | None | None | N |
T/V | 0.0798 | likely_benign | 0.0804 | benign | -0.152 | Destabilizing | 0.021 | N | 0.115 | neutral | None | None | None | None | N |
T/W | 0.5225 | ambiguous | 0.5826 | pathogenic | -0.816 | Destabilizing | 0.992 | D | 0.425 | neutral | None | None | None | None | N |
T/Y | 0.1995 | likely_benign | 0.2454 | benign | -0.497 | Destabilizing | 0.92 | D | 0.374 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.