Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5171 | 15736;15737;15738 | chr2:178733878;178733877;178733876 | chr2:179598605;179598604;179598603 |
N2AB | 4854 | 14785;14786;14787 | chr2:178733878;178733877;178733876 | chr2:179598605;179598604;179598603 |
N2A | 3927 | 12004;12005;12006 | chr2:178733878;178733877;178733876 | chr2:179598605;179598604;179598603 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs776104290 | -0.126 | 0.002 | N | 0.073 | 0.095 | 0.207176502487 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 3E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs776104290 | -0.126 | 0.002 | N | 0.073 | 0.095 | 0.207176502487 | gnomAD-4.0.0 | 1.63143E-06 | None | None | None | None | N | None | 0 | 2.34478E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2185 | likely_benign | 0.253 | benign | -0.577 | Destabilizing | 0.201 | N | 0.264 | neutral | N | 0.499238031 | None | None | N |
V/C | 0.7417 | likely_pathogenic | 0.7876 | pathogenic | -0.679 | Destabilizing | 0.992 | D | 0.337 | neutral | None | None | None | None | N |
V/D | 0.4613 | ambiguous | 0.4808 | ambiguous | -0.278 | Destabilizing | 0.85 | D | 0.387 | neutral | None | None | None | None | N |
V/E | 0.3209 | likely_benign | 0.3254 | benign | -0.363 | Destabilizing | 0.549 | D | 0.385 | neutral | N | 0.499449923 | None | None | N |
V/F | 0.1667 | likely_benign | 0.1912 | benign | -0.613 | Destabilizing | 0.739 | D | 0.393 | neutral | None | None | None | None | N |
V/G | 0.2427 | likely_benign | 0.2861 | benign | -0.75 | Destabilizing | 0.549 | D | 0.398 | neutral | D | 0.597351659 | None | None | N |
V/H | 0.5768 | likely_pathogenic | 0.6303 | pathogenic | -0.21 | Destabilizing | 0.992 | D | 0.365 | neutral | None | None | None | None | N |
V/I | 0.0707 | likely_benign | 0.0756 | benign | -0.26 | Destabilizing | 0.004 | N | 0.125 | neutral | N | 0.446899472 | None | None | N |
V/K | 0.4478 | ambiguous | 0.4708 | ambiguous | -0.569 | Destabilizing | 0.617 | D | 0.359 | neutral | None | None | None | None | N |
V/L | 0.1467 | likely_benign | 0.1655 | benign | -0.26 | Destabilizing | 0.002 | N | 0.073 | neutral | N | 0.44679994 | None | None | N |
V/M | 0.154 | likely_benign | 0.1732 | benign | -0.384 | Destabilizing | 0.85 | D | 0.361 | neutral | None | None | None | None | N |
V/N | 0.3466 | ambiguous | 0.394 | ambiguous | -0.35 | Destabilizing | 0.85 | D | 0.389 | neutral | None | None | None | None | N |
V/P | 0.7617 | likely_pathogenic | 0.8256 | pathogenic | -0.33 | Destabilizing | 0.92 | D | 0.399 | neutral | None | None | None | None | N |
V/Q | 0.3157 | likely_benign | 0.3471 | ambiguous | -0.551 | Destabilizing | 0.92 | D | 0.388 | neutral | None | None | None | None | N |
V/R | 0.3908 | ambiguous | 0.4084 | ambiguous | -0.049 | Destabilizing | 0.92 | D | 0.407 | neutral | None | None | None | None | N |
V/S | 0.2309 | likely_benign | 0.2708 | benign | -0.757 | Destabilizing | 0.059 | N | 0.198 | neutral | None | None | None | None | N |
V/T | 0.1915 | likely_benign | 0.2263 | benign | -0.736 | Destabilizing | 0.021 | N | 0.098 | neutral | None | None | None | None | N |
V/W | 0.7464 | likely_pathogenic | 0.8062 | pathogenic | -0.712 | Destabilizing | 0.992 | D | 0.429 | neutral | None | None | None | None | N |
V/Y | 0.5196 | ambiguous | 0.5877 | pathogenic | -0.422 | Destabilizing | 0.92 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.