Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5173 | 15742;15743;15744 | chr2:178733872;178733871;178733870 | chr2:179598599;179598598;179598597 |
N2AB | 4856 | 14791;14792;14793 | chr2:178733872;178733871;178733870 | chr2:179598599;179598598;179598597 |
N2A | 3929 | 12010;12011;12012 | chr2:178733872;178733871;178733870 | chr2:179598599;179598598;179598597 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.99 | D | 0.599 | 0.397 | 0.530109961917 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4676 | ambiguous | 0.6152 | pathogenic | -0.398 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | N |
K/C | 0.843 | likely_pathogenic | 0.923 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/D | 0.6964 | likely_pathogenic | 0.7841 | pathogenic | 0.528 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
K/E | 0.3286 | likely_benign | 0.4338 | ambiguous | 0.602 | Stabilizing | 0.98 | D | 0.537 | neutral | N | 0.507166245 | None | None | N |
K/F | 0.8695 | likely_pathogenic | 0.9338 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.5449 | ambiguous | 0.6889 | pathogenic | -0.693 | Destabilizing | 0.993 | D | 0.579 | neutral | None | None | None | None | N |
K/H | 0.4031 | ambiguous | 0.529 | ambiguous | -0.938 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
K/I | 0.5693 | likely_pathogenic | 0.7274 | pathogenic | 0.334 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.596702649 | None | None | N |
K/L | 0.5259 | ambiguous | 0.6781 | pathogenic | 0.334 | Stabilizing | 0.993 | D | 0.579 | neutral | None | None | None | None | N |
K/M | 0.3483 | ambiguous | 0.4632 | ambiguous | 0.143 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/N | 0.5144 | ambiguous | 0.6472 | pathogenic | 0.075 | Stabilizing | 0.997 | D | 0.557 | neutral | D | 0.587072243 | None | None | N |
K/P | 0.5247 | ambiguous | 0.6358 | pathogenic | 0.12 | Stabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
K/Q | 0.1914 | likely_benign | 0.277 | benign | -0.034 | Destabilizing | 0.994 | D | 0.569 | neutral | D | 0.544413368 | None | None | N |
K/R | 0.0841 | likely_benign | 0.1039 | benign | -0.165 | Destabilizing | 0.061 | N | 0.169 | neutral | N | 0.514815774 | None | None | N |
K/S | 0.5733 | likely_pathogenic | 0.7207 | pathogenic | -0.652 | Destabilizing | 0.993 | D | 0.528 | neutral | None | None | None | None | N |
K/T | 0.2979 | likely_benign | 0.4255 | ambiguous | -0.383 | Destabilizing | 0.99 | D | 0.599 | neutral | D | 0.556409469 | None | None | N |
K/V | 0.525 | ambiguous | 0.6756 | pathogenic | 0.12 | Stabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
K/W | 0.827 | likely_pathogenic | 0.9121 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Y | 0.7219 | likely_pathogenic | 0.8306 | pathogenic | 0.147 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.