Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5174 | 15745;15746;15747 | chr2:178733869;178733868;178733867 | chr2:179598596;179598595;179598594 |
N2AB | 4857 | 14794;14795;14796 | chr2:178733869;178733868;178733867 | chr2:179598596;179598595;179598594 |
N2A | 3930 | 12013;12014;12015 | chr2:178733869;178733868;178733867 | chr2:179598596;179598595;179598594 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.901 | N | 0.777 | 0.28 | 0.656830896108 | gnomAD-4.0.0 | 1.62443E-06 | None | None | None | None | I | None | 0 | 2.33372E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1169617547 | -0.474 | 0.008 | N | 0.377 | 0.087 | 0.257786959452 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | I | None | 0 | 2.99E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1169617547 | -0.474 | 0.008 | N | 0.377 | 0.087 | 0.257786959452 | gnomAD-4.0.0 | 3.24997E-06 | None | None | None | None | I | None | 0 | 2.33492E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2329 | likely_benign | 0.314 | benign | -1.668 | Destabilizing | 0.349 | N | 0.561 | neutral | N | 0.445633119 | None | None | I |
V/C | 0.8836 | likely_pathogenic | 0.9294 | pathogenic | -1.159 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/D | 0.8893 | likely_pathogenic | 0.9388 | pathogenic | -1.428 | Destabilizing | 0.858 | D | 0.777 | deleterious | None | None | None | None | I |
V/E | 0.8545 | likely_pathogenic | 0.9093 | pathogenic | -1.359 | Destabilizing | 0.018 | N | 0.525 | neutral | N | 0.449771049 | None | None | I |
V/F | 0.4417 | ambiguous | 0.5475 | ambiguous | -1.099 | Destabilizing | 0.923 | D | 0.791 | deleterious | None | None | None | None | I |
V/G | 0.4601 | ambiguous | 0.5666 | pathogenic | -2.075 | Highly Destabilizing | 0.901 | D | 0.777 | deleterious | N | 0.453122896 | None | None | I |
V/H | 0.9589 | likely_pathogenic | 0.9795 | pathogenic | -1.63 | Destabilizing | 0.989 | D | 0.793 | deleterious | None | None | None | None | I |
V/I | 0.0839 | likely_benign | 0.0965 | benign | -0.615 | Destabilizing | 0.008 | N | 0.377 | neutral | N | 0.412044338 | None | None | I |
V/K | 0.9198 | likely_pathogenic | 0.9515 | pathogenic | -1.255 | Destabilizing | 0.858 | D | 0.757 | deleterious | None | None | None | None | I |
V/L | 0.2424 | likely_benign | 0.2958 | benign | -0.615 | Destabilizing | 0.349 | N | 0.551 | neutral | N | 0.294535844 | None | None | I |
V/M | 0.2141 | likely_benign | 0.2817 | benign | -0.516 | Destabilizing | 0.923 | D | 0.625 | neutral | None | None | None | None | I |
V/N | 0.7654 | likely_pathogenic | 0.866 | pathogenic | -1.123 | Destabilizing | 0.923 | D | 0.822 | deleterious | None | None | None | None | I |
V/P | 0.6439 | likely_pathogenic | 0.7304 | pathogenic | -0.932 | Destabilizing | 0.961 | D | 0.791 | deleterious | None | None | None | None | I |
V/Q | 0.8791 | likely_pathogenic | 0.9324 | pathogenic | -1.196 | Destabilizing | 0.858 | D | 0.783 | deleterious | None | None | None | None | I |
V/R | 0.8997 | likely_pathogenic | 0.9355 | pathogenic | -0.885 | Destabilizing | 0.923 | D | 0.828 | deleterious | None | None | None | None | I |
V/S | 0.5656 | likely_pathogenic | 0.7001 | pathogenic | -1.77 | Destabilizing | 0.633 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/T | 0.2841 | likely_benign | 0.3938 | ambiguous | -1.577 | Destabilizing | 0.044 | N | 0.425 | neutral | None | None | None | None | I |
V/W | 0.9594 | likely_pathogenic | 0.9785 | pathogenic | -1.363 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | I |
V/Y | 0.91 | likely_pathogenic | 0.9487 | pathogenic | -1.052 | Destabilizing | 0.987 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.