Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5176 | 15751;15752;15753 | chr2:178733863;178733862;178733861 | chr2:179598590;179598589;179598588 |
N2AB | 4859 | 14800;14801;14802 | chr2:178733863;178733862;178733861 | chr2:179598590;179598589;179598588 |
N2A | 3932 | 12019;12020;12021 | chr2:178733863;178733862;178733861 | chr2:179598590;179598589;179598588 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1421517847 | 0.052 | 0.975 | D | 0.404 | 0.359 | 0.574670332726 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.97E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/Y | rs1421517847 | 0.052 | 0.975 | D | 0.404 | 0.359 | 0.574670332726 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96489E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs1421517847 | 0.052 | 0.975 | D | 0.404 | 0.359 | 0.574670332726 | gnomAD-4.0.0 | 3.12136E-06 | None | None | None | None | N | None | 0 | 6.75721E-05 | None | 0 | 0 | None | 0 | 0 | 8.5355E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2063 | likely_benign | 0.2774 | benign | -0.083 | Destabilizing | 0.27 | N | 0.344 | neutral | D | 0.593891231 | None | None | N |
D/C | 0.6604 | likely_pathogenic | 0.7743 | pathogenic | 0.073 | Stabilizing | 0.995 | D | 0.386 | neutral | None | None | None | None | N |
D/E | 0.2051 | likely_benign | 0.2506 | benign | -0.172 | Destabilizing | 0.425 | N | 0.302 | neutral | N | 0.513325146 | None | None | N |
D/F | 0.7005 | likely_pathogenic | 0.8046 | pathogenic | -0.037 | Destabilizing | 0.981 | D | 0.405 | neutral | None | None | None | None | N |
D/G | 0.1718 | likely_benign | 0.2262 | benign | -0.264 | Destabilizing | 0.002 | N | 0.135 | neutral | D | 0.599221844 | None | None | N |
D/H | 0.2848 | likely_benign | 0.3642 | ambiguous | 0.225 | Stabilizing | 0.927 | D | 0.389 | neutral | D | 0.548732623 | None | None | N |
D/I | 0.4719 | ambiguous | 0.5916 | pathogenic | 0.34 | Stabilizing | 0.944 | D | 0.445 | neutral | None | None | None | None | N |
D/K | 0.4189 | ambiguous | 0.5234 | ambiguous | 0.49 | Stabilizing | 0.704 | D | 0.296 | neutral | None | None | None | None | N |
D/L | 0.5075 | ambiguous | 0.6258 | pathogenic | 0.34 | Stabilizing | 0.704 | D | 0.401 | neutral | None | None | None | None | N |
D/M | 0.6938 | likely_pathogenic | 0.7985 | pathogenic | 0.334 | Stabilizing | 0.995 | D | 0.383 | neutral | None | None | None | None | N |
D/N | 0.0771 | likely_benign | 0.0927 | benign | 0.189 | Stabilizing | 0.002 | N | 0.071 | neutral | N | 0.451423017 | None | None | N |
D/P | 0.5736 | likely_pathogenic | 0.6954 | pathogenic | 0.221 | Stabilizing | 0.828 | D | 0.395 | neutral | None | None | None | None | N |
D/Q | 0.3997 | ambiguous | 0.5095 | ambiguous | 0.222 | Stabilizing | 0.828 | D | 0.347 | neutral | None | None | None | None | N |
D/R | 0.4465 | ambiguous | 0.5473 | ambiguous | 0.655 | Stabilizing | 0.704 | D | 0.406 | neutral | None | None | None | None | N |
D/S | 0.1153 | likely_benign | 0.1391 | benign | 0.085 | Stabilizing | 0.013 | N | 0.075 | neutral | None | None | None | None | N |
D/T | 0.2388 | likely_benign | 0.3087 | benign | 0.23 | Stabilizing | 0.329 | N | 0.276 | neutral | None | None | None | None | N |
D/V | 0.3185 | likely_benign | 0.4186 | ambiguous | 0.221 | Stabilizing | 0.642 | D | 0.425 | neutral | D | 0.561045053 | None | None | N |
D/W | 0.9235 | likely_pathogenic | 0.9543 | pathogenic | 0.064 | Stabilizing | 0.995 | D | 0.455 | neutral | None | None | None | None | N |
D/Y | 0.2821 | likely_benign | 0.3733 | ambiguous | 0.203 | Stabilizing | 0.975 | D | 0.404 | neutral | D | 0.650316935 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.