Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5177 | 15754;15755;15756 | chr2:178733860;178733859;178733858 | chr2:179598587;179598586;179598585 |
N2AB | 4860 | 14803;14804;14805 | chr2:178733860;178733859;178733858 | chr2:179598587;179598586;179598585 |
N2A | 3933 | 12022;12023;12024 | chr2:178733860;178733859;178733858 | chr2:179598587;179598586;179598585 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs1205797095 | None | 0.612 | D | 0.49 | 0.354 | 0.810717827077 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/W | rs1205797095 | None | 0.612 | D | 0.49 | 0.354 | 0.810717827077 | gnomAD-4.0.0 | 6.5716E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0865 | likely_benign | 0.1082 | benign | -1.363 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | I |
L/C | 0.1125 | likely_benign | 0.137 | benign | -0.878 | Destabilizing | 0.628 | D | 0.47 | neutral | None | None | None | None | I |
L/D | 0.2398 | likely_benign | 0.3268 | benign | -0.764 | Destabilizing | 0.136 | N | 0.599 | neutral | None | None | None | None | I |
L/E | 0.1565 | likely_benign | 0.2049 | benign | -0.747 | Destabilizing | 0.136 | N | 0.552 | neutral | None | None | None | None | I |
L/F | 0.0382 | likely_benign | 0.0433 | benign | -0.813 | Destabilizing | None | N | 0.073 | neutral | D | 0.554732472 | None | None | I |
L/G | 0.206 | likely_benign | 0.2716 | benign | -1.693 | Destabilizing | 0.031 | N | 0.406 | neutral | None | None | None | None | I |
L/H | 0.0703 | likely_benign | 0.0899 | benign | -0.908 | Destabilizing | 0.356 | N | 0.507 | neutral | None | None | None | None | I |
L/I | 0.0432 | likely_benign | 0.0459 | benign | -0.535 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | I |
L/K | 0.1234 | likely_benign | 0.1604 | benign | -1.002 | Destabilizing | 0.072 | N | 0.54 | neutral | None | None | None | None | I |
L/M | 0.0639 | likely_benign | 0.0682 | benign | -0.517 | Destabilizing | 0.171 | N | 0.428 | neutral | N | 0.511970565 | None | None | I |
L/N | 0.1208 | likely_benign | 0.1612 | benign | -0.831 | Destabilizing | 0.136 | N | 0.607 | neutral | None | None | None | None | I |
L/P | 0.5899 | likely_pathogenic | 0.6622 | pathogenic | -0.779 | Destabilizing | 0.136 | N | 0.605 | neutral | None | None | None | None | I |
L/Q | 0.0725 | likely_benign | 0.0908 | benign | -0.945 | Destabilizing | 0.628 | D | 0.609 | neutral | None | None | None | None | I |
L/R | 0.0852 | likely_benign | 0.1086 | benign | -0.489 | Destabilizing | 0.136 | N | 0.629 | neutral | None | None | None | None | I |
L/S | 0.0868 | likely_benign | 0.1165 | benign | -1.428 | Destabilizing | 0.012 | N | 0.369 | neutral | N | 0.515696288 | None | None | I |
L/T | 0.0704 | likely_benign | 0.0902 | benign | -1.287 | Destabilizing | None | N | 0.157 | neutral | None | None | None | None | I |
L/V | 0.0411 | likely_benign | 0.0446 | benign | -0.779 | Destabilizing | None | N | 0.067 | neutral | N | 0.443318264 | None | None | I |
L/W | 0.092 | likely_benign | 0.1047 | benign | -0.906 | Destabilizing | 0.612 | D | 0.49 | neutral | D | 0.67809784 | None | None | I |
L/Y | 0.0781 | likely_benign | 0.0956 | benign | -0.678 | Destabilizing | 0.038 | N | 0.493 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.