Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5182 | 15769;15770;15771 | chr2:178733845;178733844;178733843 | chr2:179598572;179598571;179598570 |
N2AB | 4865 | 14818;14819;14820 | chr2:178733845;178733844;178733843 | chr2:179598572;179598571;179598570 |
N2A | 3938 | 12037;12038;12039 | chr2:178733845;178733844;178733843 | chr2:179598572;179598571;179598570 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs775552018 | -0.439 | 1.0 | D | 0.863 | 0.741 | 0.906498380218 | gnomAD-2.1.1 | 2.43E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.35196E-04 | None | 0 | None | 0 | 0 | 0 |
G/R | rs775552018 | -0.439 | 1.0 | D | 0.863 | 0.741 | 0.906498380218 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs775552018 | -0.439 | 1.0 | D | 0.863 | 0.741 | 0.906498380218 | gnomAD-4.0.0 | 6.86816E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0283E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2487 | likely_benign | 0.292 | benign | -0.305 | Destabilizing | 1.0 | D | 0.784 | deleterious | D | 0.728926006 | None | None | I |
G/C | 0.3807 | ambiguous | 0.4442 | ambiguous | -0.873 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
G/D | 0.1863 | likely_benign | 0.2305 | benign | -0.592 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/E | 0.2312 | likely_benign | 0.2877 | benign | -0.761 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.726575865 | None | None | I |
G/F | 0.6512 | likely_pathogenic | 0.7173 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/H | 0.3833 | ambiguous | 0.459 | ambiguous | -0.545 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/I | 0.5436 | ambiguous | 0.6027 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/K | 0.338 | likely_benign | 0.4182 | ambiguous | -0.724 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/L | 0.557 | ambiguous | 0.634 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/M | 0.6053 | likely_pathogenic | 0.6684 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/N | 0.2217 | likely_benign | 0.2753 | benign | -0.409 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/P | 0.8989 | likely_pathogenic | 0.9255 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/Q | 0.2889 | likely_benign | 0.3604 | ambiguous | -0.726 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/R | 0.2494 | likely_benign | 0.3041 | benign | -0.279 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.765550372 | None | None | I |
G/S | 0.115 | likely_benign | 0.1334 | benign | -0.553 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/T | 0.2939 | likely_benign | 0.3377 | benign | -0.655 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/V | 0.4339 | ambiguous | 0.4942 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.851062377 | None | None | I |
G/W | 0.5068 | ambiguous | 0.5757 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/Y | 0.4997 | ambiguous | 0.5915 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.