Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5184 | 15775;15776;15777 | chr2:178733839;178733838;178733837 | chr2:179598566;179598565;179598564 |
N2AB | 4867 | 14824;14825;14826 | chr2:178733839;178733838;178733837 | chr2:179598566;179598565;179598564 |
N2A | 3940 | 12043;12044;12045 | chr2:178733839;178733838;178733837 | chr2:179598566;179598565;179598564 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.022 | N | 0.111 | 0.079 | 0.110078149338 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | None | None | 0.966 | D | 0.412 | 0.286 | 0.348764635752 | gnomAD-4.0.0 | 6.84379E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99685E-07 | 0 | 0 |
T/N | None | None | 0.005 | N | 0.106 | 0.055 | 0.202086224978 | gnomAD-4.0.0 | 6.84379E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99685E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0674 | likely_benign | 0.071 | benign | -0.526 | Destabilizing | 0.022 | N | 0.111 | neutral | N | 0.456848273 | None | None | I |
T/C | 0.3513 | ambiguous | 0.434 | ambiguous | -0.38 | Destabilizing | 0.998 | D | 0.389 | neutral | None | None | None | None | I |
T/D | 0.2244 | likely_benign | 0.2762 | benign | 0.201 | Stabilizing | 0.728 | D | 0.351 | neutral | None | None | None | None | I |
T/E | 0.1762 | likely_benign | 0.202 | benign | 0.178 | Stabilizing | 0.842 | D | 0.349 | neutral | None | None | None | None | I |
T/F | 0.1914 | likely_benign | 0.2315 | benign | -0.741 | Destabilizing | 0.991 | D | 0.394 | neutral | None | None | None | None | I |
T/G | 0.1919 | likely_benign | 0.2308 | benign | -0.745 | Destabilizing | 0.525 | D | 0.357 | neutral | None | None | None | None | I |
T/H | 0.1854 | likely_benign | 0.2205 | benign | -1.037 | Destabilizing | 0.974 | D | 0.375 | neutral | None | None | None | None | I |
T/I | 0.126 | likely_benign | 0.1469 | benign | -0.052 | Destabilizing | 0.966 | D | 0.412 | neutral | D | 0.541294959 | None | None | I |
T/K | 0.1393 | likely_benign | 0.1587 | benign | -0.514 | Destabilizing | 0.842 | D | 0.351 | neutral | None | None | None | None | I |
T/L | 0.086 | likely_benign | 0.0929 | benign | -0.052 | Destabilizing | 0.842 | D | 0.343 | neutral | None | None | None | None | I |
T/M | 0.0708 | likely_benign | 0.0716 | benign | 0.065 | Stabilizing | 0.991 | D | 0.393 | neutral | None | None | None | None | I |
T/N | 0.0841 | likely_benign | 0.0966 | benign | -0.413 | Destabilizing | 0.005 | N | 0.106 | neutral | N | 0.451375931 | None | None | I |
T/P | 0.0807 | likely_benign | 0.084 | benign | -0.178 | Destabilizing | 0.012 | N | 0.248 | neutral | N | 0.448027187 | None | None | I |
T/Q | 0.1542 | likely_benign | 0.1724 | benign | -0.555 | Destabilizing | 0.974 | D | 0.432 | neutral | None | None | None | None | I |
T/R | 0.1171 | likely_benign | 0.1294 | benign | -0.317 | Destabilizing | 0.842 | D | 0.405 | neutral | None | None | None | None | I |
T/S | 0.0852 | likely_benign | 0.0955 | benign | -0.678 | Destabilizing | 0.136 | N | 0.133 | neutral | N | 0.447308652 | None | None | I |
T/V | 0.1037 | likely_benign | 0.1164 | benign | -0.178 | Destabilizing | 0.842 | D | 0.231 | neutral | None | None | None | None | I |
T/W | 0.4915 | ambiguous | 0.5501 | ambiguous | -0.719 | Destabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | I |
T/Y | 0.2043 | likely_benign | 0.2499 | benign | -0.455 | Destabilizing | 0.991 | D | 0.392 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.