Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5186 | 15781;15782;15783 | chr2:178733833;178733832;178733831 | chr2:179598560;179598559;179598558 |
N2AB | 4869 | 14830;14831;14832 | chr2:178733833;178733832;178733831 | chr2:179598560;179598559;179598558 |
N2A | 3942 | 12049;12050;12051 | chr2:178733833;178733832;178733831 | chr2:179598560;179598559;179598558 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.016 | N | 0.357 | 0.113 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0861 | likely_benign | 0.0942 | benign | -0.43 | Destabilizing | 0.201 | N | 0.472 | neutral | N | 0.456961125 | None | None | N |
T/C | 0.3474 | ambiguous | 0.4154 | ambiguous | -0.423 | Destabilizing | 0.992 | D | 0.543 | neutral | None | None | None | None | N |
T/D | 0.3918 | ambiguous | 0.4847 | ambiguous | 0.33 | Stabilizing | 0.617 | D | 0.489 | neutral | None | None | None | None | N |
T/E | 0.2386 | likely_benign | 0.2748 | benign | 0.352 | Stabilizing | 0.617 | D | 0.506 | neutral | None | None | None | None | N |
T/F | 0.1721 | likely_benign | 0.2024 | benign | -0.576 | Destabilizing | 0.85 | D | 0.592 | neutral | None | None | None | None | N |
T/G | 0.3047 | likely_benign | 0.3686 | ambiguous | -0.679 | Destabilizing | 0.447 | N | 0.517 | neutral | None | None | None | None | N |
T/H | 0.1949 | likely_benign | 0.2263 | benign | -0.849 | Destabilizing | 0.992 | D | 0.588 | neutral | None | None | None | None | N |
T/I | 0.1045 | likely_benign | 0.1187 | benign | 0.135 | Stabilizing | 0.004 | N | 0.401 | neutral | N | 0.459277953 | None | None | N |
T/K | 0.1608 | likely_benign | 0.1817 | benign | -0.336 | Destabilizing | 0.009 | N | 0.357 | neutral | None | None | None | None | N |
T/L | 0.0874 | likely_benign | 0.0932 | benign | 0.135 | Stabilizing | 0.103 | N | 0.487 | neutral | None | None | None | None | N |
T/M | 0.0819 | likely_benign | 0.0835 | benign | -0.017 | Destabilizing | 0.85 | D | 0.554 | neutral | None | None | None | None | N |
T/N | 0.1183 | likely_benign | 0.1405 | benign | -0.406 | Destabilizing | 0.549 | D | 0.49 | neutral | N | 0.453390331 | None | None | N |
T/P | 0.2196 | likely_benign | 0.2592 | benign | -0.02 | Destabilizing | 0.896 | D | 0.567 | neutral | D | 0.625687784 | None | None | N |
T/Q | 0.1757 | likely_benign | 0.1941 | benign | -0.42 | Destabilizing | 0.85 | D | 0.569 | neutral | None | None | None | None | N |
T/R | 0.133 | likely_benign | 0.1458 | benign | -0.23 | Destabilizing | 0.447 | N | 0.495 | neutral | None | None | None | None | N |
T/S | 0.1035 | likely_benign | 0.1184 | benign | -0.679 | Destabilizing | 0.016 | N | 0.357 | neutral | N | 0.452574579 | None | None | N |
T/V | 0.0963 | likely_benign | 0.1091 | benign | -0.02 | Destabilizing | 0.103 | N | 0.533 | neutral | None | None | None | None | N |
T/W | 0.5261 | ambiguous | 0.5892 | pathogenic | -0.622 | Destabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | N |
T/Y | 0.2055 | likely_benign | 0.2494 | benign | -0.306 | Destabilizing | 0.92 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.