Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5187 | 15784;15785;15786 | chr2:178733830;178733829;178733828 | chr2:179598557;179598556;179598555 |
N2AB | 4870 | 14833;14834;14835 | chr2:178733830;178733829;178733828 | chr2:179598557;179598556;179598555 |
N2A | 3943 | 12052;12053;12054 | chr2:178733830;178733829;178733828 | chr2:179598557;179598556;179598555 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | D | 0.897 | 0.854 | 0.90282609855 | gnomAD-4.0.0 | 6.84277E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9956E-07 | 0 | 0 |
L/Q | None | None | 0.997 | D | 0.888 | 0.79 | 0.895693387583 | gnomAD-4.0.0 | 6.84277E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51978E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8357 | likely_pathogenic | 0.8937 | pathogenic | -2.503 | Highly Destabilizing | 0.983 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/C | 0.8177 | likely_pathogenic | 0.8777 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/D | 0.9967 | likely_pathogenic | 0.9983 | pathogenic | -3.123 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/E | 0.9758 | likely_pathogenic | 0.9861 | pathogenic | -2.822 | Highly Destabilizing | 0.998 | D | 0.89 | deleterious | None | None | None | None | N |
L/F | 0.0972 | likely_benign | 0.1193 | benign | -1.469 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/G | 0.9642 | likely_pathogenic | 0.9795 | pathogenic | -3.084 | Highly Destabilizing | 0.998 | D | 0.888 | deleterious | None | None | None | None | N |
L/H | 0.8608 | likely_pathogenic | 0.915 | pathogenic | -2.598 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/I | 0.1269 | likely_benign | 0.1436 | benign | -0.777 | Destabilizing | 0.966 | D | 0.608 | neutral | None | None | None | None | N |
L/K | 0.9434 | likely_pathogenic | 0.9673 | pathogenic | -2.016 | Highly Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.1409 | likely_benign | 0.1605 | benign | -0.836 | Destabilizing | 0.898 | D | 0.547 | neutral | D | 0.57361859 | None | None | N |
L/N | 0.9781 | likely_pathogenic | 0.9881 | pathogenic | -2.622 | Highly Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
L/P | 0.9882 | likely_pathogenic | 0.9917 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.897 | deleterious | D | 0.843746367 | None | None | N |
L/Q | 0.8464 | likely_pathogenic | 0.9017 | pathogenic | -2.332 | Highly Destabilizing | 0.997 | D | 0.888 | deleterious | D | 0.843746367 | None | None | N |
L/R | 0.8901 | likely_pathogenic | 0.9315 | pathogenic | -2.019 | Highly Destabilizing | 0.997 | D | 0.881 | deleterious | D | 0.843746367 | None | None | N |
L/S | 0.9365 | likely_pathogenic | 0.9643 | pathogenic | -3.235 | Highly Destabilizing | 0.998 | D | 0.88 | deleterious | None | None | None | None | N |
L/T | 0.8951 | likely_pathogenic | 0.937 | pathogenic | -2.768 | Highly Destabilizing | 0.995 | D | 0.806 | deleterious | None | None | None | None | N |
L/V | 0.17 | likely_benign | 0.2038 | benign | -1.34 | Destabilizing | 0.955 | D | 0.636 | neutral | D | 0.704838234 | None | None | N |
L/W | 0.5119 | ambiguous | 0.6072 | pathogenic | -1.822 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/Y | 0.6236 | likely_pathogenic | 0.7189 | pathogenic | -1.549 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.