Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5190 | 15793;15794;15795 | chr2:178733821;178733820;178733819 | chr2:179598548;179598547;179598546 |
N2AB | 4873 | 14842;14843;14844 | chr2:178733821;178733820;178733819 | chr2:179598548;179598547;179598546 |
N2A | 3946 | 12061;12062;12063 | chr2:178733821;178733820;178733819 | chr2:179598548;179598547;179598546 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.201 | N | 0.517 | 0.126 | 0.373897652646 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5082 | ambiguous | 0.569 | pathogenic | -0.809 | Destabilizing | 0.92 | D | 0.536 | neutral | None | None | None | None | N |
A/D | 0.3386 | likely_benign | 0.3996 | ambiguous | -0.964 | Destabilizing | 0.896 | D | 0.577 | neutral | N | 0.505913929 | None | None | N |
A/E | 0.2299 | likely_benign | 0.2611 | benign | -0.932 | Destabilizing | 0.766 | D | 0.539 | neutral | None | None | None | None | N |
A/F | 0.3017 | likely_benign | 0.361 | ambiguous | -0.698 | Destabilizing | 0.85 | D | 0.571 | neutral | None | None | None | None | N |
A/G | 0.1756 | likely_benign | 0.216 | benign | -1.106 | Destabilizing | 0.712 | D | 0.499 | neutral | N | 0.512068058 | None | None | N |
A/H | 0.4818 | ambiguous | 0.5351 | ambiguous | -1.316 | Destabilizing | 0.992 | D | 0.565 | neutral | None | None | None | None | N |
A/I | 0.1657 | likely_benign | 0.2084 | benign | -0.038 | Destabilizing | 0.103 | N | 0.503 | neutral | None | None | None | None | N |
A/K | 0.428 | ambiguous | 0.4751 | ambiguous | -1.003 | Destabilizing | 0.617 | D | 0.541 | neutral | None | None | None | None | N |
A/L | 0.1554 | likely_benign | 0.1859 | benign | -0.038 | Destabilizing | 0.25 | N | 0.498 | neutral | None | None | None | None | N |
A/M | 0.1719 | likely_benign | 0.2047 | benign | -0.137 | Destabilizing | 0.85 | D | 0.565 | neutral | None | None | None | None | N |
A/N | 0.2382 | likely_benign | 0.2918 | benign | -0.836 | Destabilizing | 0.92 | D | 0.585 | neutral | None | None | None | None | N |
A/P | 0.6043 | likely_pathogenic | 0.7341 | pathogenic | -0.244 | Destabilizing | 0.963 | D | 0.58 | neutral | N | 0.507787521 | None | None | N |
A/Q | 0.3166 | likely_benign | 0.349 | ambiguous | -0.883 | Destabilizing | 0.972 | D | 0.575 | neutral | None | None | None | None | N |
A/R | 0.403 | ambiguous | 0.4274 | ambiguous | -0.837 | Destabilizing | 0.92 | D | 0.589 | neutral | None | None | None | None | N |
A/S | 0.0938 | likely_benign | 0.1011 | benign | -1.272 | Destabilizing | 0.201 | N | 0.517 | neutral | N | 0.474008613 | None | None | N |
A/T | 0.0762 | likely_benign | 0.082 | benign | -1.133 | Destabilizing | 0.007 | N | 0.167 | neutral | N | 0.428186714 | None | None | N |
A/V | 0.0926 | likely_benign | 0.1084 | benign | -0.244 | Destabilizing | 0.002 | N | 0.167 | neutral | N | 0.444069366 | None | None | N |
A/W | 0.7337 | likely_pathogenic | 0.7856 | pathogenic | -1.154 | Destabilizing | 0.992 | D | 0.632 | neutral | None | None | None | None | N |
A/Y | 0.4415 | ambiguous | 0.5154 | ambiguous | -0.68 | Destabilizing | 0.92 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.