Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5191 | 15796;15797;15798 | chr2:178733818;178733817;178733816 | chr2:179598545;179598544;179598543 |
N2AB | 4874 | 14845;14846;14847 | chr2:178733818;178733817;178733816 | chr2:179598545;179598544;179598543 |
N2A | 3947 | 12064;12065;12066 | chr2:178733818;178733817;178733816 | chr2:179598545;179598544;179598543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.928 | D | 0.849 | 0.774 | 0.937896326255 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5945 | likely_pathogenic | 0.7294 | pathogenic | -1.605 | Destabilizing | 0.645 | D | 0.599 | neutral | D | 0.529165583 | None | None | N |
V/C | 0.9232 | likely_pathogenic | 0.9577 | pathogenic | -1.105 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
V/D | 0.9939 | likely_pathogenic | 0.9969 | pathogenic | -1.488 | Destabilizing | 0.945 | D | 0.854 | deleterious | None | None | None | None | N |
V/E | 0.9776 | likely_pathogenic | 0.987 | pathogenic | -1.293 | Destabilizing | 0.928 | D | 0.84 | deleterious | D | 0.7616757 | None | None | N |
V/F | 0.4779 | ambiguous | 0.5634 | ambiguous | -0.839 | Destabilizing | 0.894 | D | 0.818 | deleterious | None | None | None | None | N |
V/G | 0.8174 | likely_pathogenic | 0.8925 | pathogenic | -2.13 | Highly Destabilizing | 0.928 | D | 0.849 | deleterious | D | 0.686585467 | None | None | N |
V/H | 0.9897 | likely_pathogenic | 0.9951 | pathogenic | -1.838 | Destabilizing | 0.995 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.0834 | likely_benign | 0.0904 | benign | -0.168 | Destabilizing | 0.007 | N | 0.189 | neutral | None | None | None | None | N |
V/K | 0.981 | likely_pathogenic | 0.989 | pathogenic | -1.157 | Destabilizing | 0.945 | D | 0.841 | deleterious | None | None | None | None | N |
V/L | 0.2912 | likely_benign | 0.3782 | ambiguous | -0.168 | Destabilizing | 0.114 | N | 0.56 | neutral | D | 0.533733894 | None | None | N |
V/M | 0.3483 | ambiguous | 0.4498 | ambiguous | -0.242 | Destabilizing | 0.864 | D | 0.749 | deleterious | D | 0.740956048 | None | None | N |
V/N | 0.9719 | likely_pathogenic | 0.9868 | pathogenic | -1.334 | Destabilizing | 0.981 | D | 0.872 | deleterious | None | None | None | None | N |
V/P | 0.9766 | likely_pathogenic | 0.9876 | pathogenic | -0.616 | Destabilizing | 0.981 | D | 0.844 | deleterious | None | None | None | None | N |
V/Q | 0.9687 | likely_pathogenic | 0.983 | pathogenic | -1.174 | Destabilizing | 0.981 | D | 0.856 | deleterious | None | None | None | None | N |
V/R | 0.9691 | likely_pathogenic | 0.981 | pathogenic | -1.103 | Destabilizing | 0.945 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.8596 | likely_pathogenic | 0.9253 | pathogenic | -2.046 | Highly Destabilizing | 0.945 | D | 0.834 | deleterious | None | None | None | None | N |
V/T | 0.6616 | likely_pathogenic | 0.7912 | pathogenic | -1.698 | Destabilizing | 0.707 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/W | 0.9841 | likely_pathogenic | 0.9914 | pathogenic | -1.279 | Destabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | N |
V/Y | 0.9433 | likely_pathogenic | 0.9677 | pathogenic | -0.86 | Destabilizing | 0.945 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.