Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5192 | 15799;15800;15801 | chr2:178733815;178733814;178733813 | chr2:179598542;179598541;179598540 |
N2AB | 4875 | 14848;14849;14850 | chr2:178733815;178733814;178733813 | chr2:179598542;179598541;179598540 |
N2A | 3948 | 12067;12068;12069 | chr2:178733815;178733814;178733813 | chr2:179598542;179598541;179598540 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.001 | N | 0.119 | 0.131 | 0.181679512989 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2546 | likely_benign | 0.2651 | benign | -0.041 | Destabilizing | 0.25 | N | 0.333 | neutral | None | None | None | None | I |
R/C | 0.1849 | likely_benign | 0.2055 | benign | -0.27 | Destabilizing | 0.992 | D | 0.307 | neutral | None | None | None | None | I |
R/D | 0.5912 | likely_pathogenic | 0.6065 | pathogenic | -0.156 | Destabilizing | 0.617 | D | 0.387 | neutral | None | None | None | None | I |
R/E | 0.2849 | likely_benign | 0.2767 | benign | -0.114 | Destabilizing | 0.25 | N | 0.307 | neutral | None | None | None | None | I |
R/F | 0.4414 | ambiguous | 0.4701 | ambiguous | -0.358 | Destabilizing | 0.972 | D | 0.324 | neutral | None | None | None | None | I |
R/G | 0.1941 | likely_benign | 0.2067 | benign | -0.191 | Destabilizing | 0.549 | D | 0.37 | neutral | N | 0.48610521 | None | None | I |
R/H | 0.0996 | likely_benign | 0.099 | benign | -0.608 | Destabilizing | 0.92 | D | 0.38 | neutral | None | None | None | None | I |
R/I | 0.2227 | likely_benign | 0.2322 | benign | 0.31 | Stabilizing | 0.896 | D | 0.354 | neutral | N | 0.494782061 | None | None | I |
R/K | 0.0753 | likely_benign | 0.0773 | benign | -0.147 | Destabilizing | 0.001 | N | 0.119 | neutral | N | 0.367531515 | None | None | I |
R/L | 0.2039 | likely_benign | 0.218 | benign | 0.31 | Stabilizing | 0.617 | D | 0.37 | neutral | None | None | None | None | I |
R/M | 0.2111 | likely_benign | 0.2138 | benign | -0.052 | Destabilizing | 0.972 | D | 0.351 | neutral | None | None | None | None | I |
R/N | 0.4368 | ambiguous | 0.4427 | ambiguous | 0.002 | Stabilizing | 0.617 | D | 0.312 | neutral | None | None | None | None | I |
R/P | 0.8822 | likely_pathogenic | 0.9112 | pathogenic | 0.212 | Stabilizing | 0.766 | D | 0.381 | neutral | None | None | None | None | I |
R/Q | 0.0945 | likely_benign | 0.0941 | benign | -0.09 | Destabilizing | 0.447 | N | 0.323 | neutral | None | None | None | None | I |
R/S | 0.3057 | likely_benign | 0.3065 | benign | -0.298 | Destabilizing | 0.201 | N | 0.342 | neutral | N | 0.43847237 | None | None | I |
R/T | 0.1574 | likely_benign | 0.1486 | benign | -0.141 | Destabilizing | 0.549 | D | 0.379 | neutral | N | 0.367878309 | None | None | I |
R/V | 0.2749 | likely_benign | 0.2884 | benign | 0.212 | Stabilizing | 0.617 | D | 0.395 | neutral | None | None | None | None | I |
R/W | 0.1883 | likely_benign | 0.1946 | benign | -0.474 | Destabilizing | 0.992 | D | 0.331 | neutral | None | None | None | None | I |
R/Y | 0.3459 | ambiguous | 0.3784 | ambiguous | -0.061 | Destabilizing | 0.972 | D | 0.355 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.