Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5206 | 15841;15842;15843 | chr2:178733773;178733772;178733771 | chr2:179598500;179598499;179598498 |
N2AB | 4889 | 14890;14891;14892 | chr2:178733773;178733772;178733771 | chr2:179598500;179598499;179598498 |
N2A | 3962 | 12109;12110;12111 | chr2:178733773;178733772;178733771 | chr2:179598500;179598499;179598498 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.003 | N | 0.287 | 0.159 | 0.297031009988 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1268 | likely_benign | 0.1332 | benign | -0.309 | Destabilizing | 0.338 | N | 0.444 | neutral | D | 0.543018393 | None | None | N |
E/C | 0.747 | likely_pathogenic | 0.7921 | pathogenic | -0.229 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
E/D | 0.083 | likely_benign | 0.0932 | benign | -0.333 | Destabilizing | 0.001 | N | 0.234 | neutral | D | 0.538882695 | None | None | N |
E/F | 0.6128 | likely_pathogenic | 0.6801 | pathogenic | -0.133 | Destabilizing | 0.967 | D | 0.597 | neutral | None | None | None | None | N |
E/G | 0.1516 | likely_benign | 0.163 | benign | -0.499 | Destabilizing | 0.505 | D | 0.427 | neutral | D | 0.548465147 | None | None | N |
E/H | 0.3007 | likely_benign | 0.3256 | benign | 0.254 | Stabilizing | 0.973 | D | 0.389 | neutral | None | None | None | None | N |
E/I | 0.2668 | likely_benign | 0.3007 | benign | 0.153 | Stabilizing | 0.906 | D | 0.603 | neutral | None | None | None | None | N |
E/K | 0.118 | likely_benign | 0.1121 | benign | 0.247 | Stabilizing | 0.003 | N | 0.287 | neutral | N | 0.501069412 | None | None | N |
E/L | 0.3003 | likely_benign | 0.3369 | benign | 0.153 | Stabilizing | 0.826 | D | 0.569 | neutral | None | None | None | None | N |
E/M | 0.3378 | likely_benign | 0.3682 | ambiguous | 0.073 | Stabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
E/N | 0.1465 | likely_benign | 0.1623 | benign | -0.112 | Destabilizing | 0.404 | N | 0.366 | neutral | None | None | None | None | N |
E/P | 0.7627 | likely_pathogenic | 0.7707 | pathogenic | 0.019 | Stabilizing | 0.906 | D | 0.444 | neutral | None | None | None | None | N |
E/Q | 0.1189 | likely_benign | 0.1171 | benign | -0.064 | Destabilizing | 0.338 | N | 0.373 | neutral | N | 0.50672401 | None | None | N |
E/R | 0.2102 | likely_benign | 0.2018 | benign | 0.537 | Stabilizing | 0.704 | D | 0.355 | neutral | None | None | None | None | N |
E/S | 0.1569 | likely_benign | 0.164 | benign | -0.266 | Destabilizing | 0.404 | N | 0.403 | neutral | None | None | None | None | N |
E/T | 0.1592 | likely_benign | 0.1687 | benign | -0.108 | Destabilizing | 0.826 | D | 0.366 | neutral | None | None | None | None | N |
E/V | 0.1554 | likely_benign | 0.173 | benign | 0.019 | Stabilizing | 0.782 | D | 0.499 | neutral | N | 0.511970139 | None | None | N |
E/W | 0.793 | likely_pathogenic | 0.8326 | pathogenic | 0.015 | Stabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | N |
E/Y | 0.4361 | ambiguous | 0.496 | ambiguous | 0.104 | Stabilizing | 0.967 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.