Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5207 | 15844;15845;15846 | chr2:178733770;178733769;178733768 | chr2:179598497;179598496;179598495 |
N2AB | 4890 | 14893;14894;14895 | chr2:178733770;178733769;178733768 | chr2:179598497;179598496;179598495 |
N2A | 3963 | 12112;12113;12114 | chr2:178733770;178733769;178733768 | chr2:179598497;179598496;179598495 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.097 | 0.116 | 0.248417906384 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1212 | likely_benign | 0.1163 | benign | -0.777 | Destabilizing | None | N | 0.118 | neutral | N | 0.506933316 | None | None | N |
V/C | 0.5413 | ambiguous | 0.5449 | ambiguous | -0.507 | Destabilizing | 0.676 | D | 0.385 | neutral | None | None | None | None | N |
V/D | 0.1818 | likely_benign | 0.19 | benign | -0.695 | Destabilizing | 0.171 | N | 0.44 | neutral | N | 0.504533622 | None | None | N |
V/E | 0.1452 | likely_benign | 0.1496 | benign | -0.8 | Destabilizing | 0.072 | N | 0.392 | neutral | None | None | None | None | N |
V/F | 0.1136 | likely_benign | 0.1114 | benign | -0.905 | Destabilizing | 0.029 | N | 0.369 | neutral | D | 0.621340265 | None | None | N |
V/G | 0.1504 | likely_benign | 0.1488 | benign | -0.952 | Destabilizing | 0.029 | N | 0.407 | neutral | D | 0.579939606 | None | None | N |
V/H | 0.3349 | likely_benign | 0.3546 | ambiguous | -0.579 | Destabilizing | 0.507 | D | 0.417 | neutral | None | None | None | None | N |
V/I | 0.0622 | likely_benign | 0.0618 | benign | -0.448 | Destabilizing | None | N | 0.127 | neutral | N | 0.468349457 | None | None | N |
V/K | 0.1816 | likely_benign | 0.1856 | benign | -0.711 | Destabilizing | 0.072 | N | 0.397 | neutral | None | None | None | None | N |
V/L | 0.1097 | likely_benign | 0.1075 | benign | -0.448 | Destabilizing | None | N | 0.097 | neutral | N | 0.504450669 | None | None | N |
V/M | 0.0904 | likely_benign | 0.0908 | benign | -0.336 | Destabilizing | 0.214 | N | 0.408 | neutral | None | None | None | None | N |
V/N | 0.1259 | likely_benign | 0.1337 | benign | -0.329 | Destabilizing | 0.214 | N | 0.432 | neutral | None | None | None | None | N |
V/P | 0.1907 | likely_benign | 0.1902 | benign | -0.522 | Destabilizing | 0.214 | N | 0.423 | neutral | None | None | None | None | N |
V/Q | 0.1931 | likely_benign | 0.2011 | benign | -0.607 | Destabilizing | 0.356 | N | 0.417 | neutral | None | None | None | None | N |
V/R | 0.1785 | likely_benign | 0.1784 | benign | -0.136 | Destabilizing | 0.214 | N | 0.434 | neutral | None | None | None | None | N |
V/S | 0.1376 | likely_benign | 0.1418 | benign | -0.671 | Destabilizing | 0.038 | N | 0.362 | neutral | None | None | None | None | N |
V/T | 0.1247 | likely_benign | 0.1286 | benign | -0.683 | Destabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
V/W | 0.5485 | ambiguous | 0.5677 | pathogenic | -1.004 | Destabilizing | 0.864 | D | 0.444 | neutral | None | None | None | None | N |
V/Y | 0.2989 | likely_benign | 0.312 | benign | -0.723 | Destabilizing | 0.002 | N | 0.202 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.