Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5213 | 15862;15863;15864 | chr2:178733752;178733751;178733750 | chr2:179598479;179598478;179598477 |
N2AB | 4896 | 14911;14912;14913 | chr2:178733752;178733751;178733750 | chr2:179598479;179598478;179598477 |
N2A | 3969 | 12130;12131;12132 | chr2:178733752;178733751;178733750 | chr2:179598479;179598478;179598477 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2080952653 | None | 0.005 | N | 0.087 | 0.065 | 0.0666544352282 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs2080952653 | None | 0.005 | N | 0.087 | 0.065 | 0.0666544352282 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2082 | likely_benign | 0.2521 | benign | 0.05 | Stabilizing | 0.525 | D | 0.283 | neutral | None | None | None | None | N |
K/C | 0.5596 | ambiguous | 0.6348 | pathogenic | -0.398 | Destabilizing | 0.998 | D | 0.363 | neutral | None | None | None | None | N |
K/D | 0.2554 | likely_benign | 0.3078 | benign | -0.146 | Destabilizing | 0.728 | D | 0.275 | neutral | None | None | None | None | N |
K/E | 0.1063 | likely_benign | 0.1167 | benign | -0.143 | Destabilizing | 0.625 | D | 0.228 | neutral | N | 0.456309583 | None | None | N |
K/F | 0.5532 | ambiguous | 0.6265 | pathogenic | -0.212 | Destabilizing | 0.991 | D | 0.361 | neutral | None | None | None | None | N |
K/G | 0.2663 | likely_benign | 0.3255 | benign | -0.116 | Destabilizing | 0.525 | D | 0.228 | neutral | None | None | None | None | N |
K/H | 0.209 | likely_benign | 0.2372 | benign | -0.253 | Destabilizing | 0.974 | D | 0.307 | neutral | None | None | None | None | N |
K/I | 0.2203 | likely_benign | 0.259 | benign | 0.405 | Stabilizing | 0.934 | D | 0.391 | neutral | N | 0.465960604 | None | None | N |
K/L | 0.2231 | likely_benign | 0.2639 | benign | 0.405 | Stabilizing | 0.842 | D | 0.297 | neutral | None | None | None | None | N |
K/M | 0.1544 | likely_benign | 0.1767 | benign | 0.016 | Stabilizing | 0.991 | D | 0.303 | neutral | None | None | None | None | N |
K/N | 0.1461 | likely_benign | 0.1788 | benign | 0.029 | Stabilizing | 0.005 | N | 0.087 | neutral | N | 0.387308191 | None | None | N |
K/P | 0.5373 | ambiguous | 0.5722 | pathogenic | 0.313 | Stabilizing | 0.974 | D | 0.341 | neutral | None | None | None | None | N |
K/Q | 0.1006 | likely_benign | 0.1078 | benign | -0.099 | Destabilizing | 0.891 | D | 0.336 | neutral | N | 0.453785179 | None | None | N |
K/R | 0.0787 | likely_benign | 0.0807 | benign | -0.082 | Destabilizing | 0.801 | D | 0.266 | neutral | N | 0.4084737 | None | None | N |
K/S | 0.1982 | likely_benign | 0.2424 | benign | -0.366 | Destabilizing | 0.172 | N | 0.111 | neutral | None | None | None | None | N |
K/T | 0.1265 | likely_benign | 0.1479 | benign | -0.229 | Destabilizing | 0.051 | N | 0.194 | neutral | N | 0.452831329 | None | None | N |
K/V | 0.2152 | likely_benign | 0.2557 | benign | 0.313 | Stabilizing | 0.842 | D | 0.35 | neutral | None | None | None | None | N |
K/W | 0.6079 | likely_pathogenic | 0.6613 | pathogenic | -0.296 | Destabilizing | 0.998 | D | 0.481 | neutral | None | None | None | None | N |
K/Y | 0.3969 | ambiguous | 0.4592 | ambiguous | 0.062 | Stabilizing | 0.991 | D | 0.326 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.